English
Related papers

Related papers: Approximating binary longest common subsequence in…

200 papers

We consider the problem of finding, given two documents of total length $n$, a longest string occurring as a substring of both documents. This problem, known as the Longest Common Substring (LCS) problem, has a classic $O(n)$-time solution…

Data Structures and Algorithms · Computer Science 2020-04-29 Stav Ben-Nun , Shay Golan , Tomasz Kociumaka , Matan Kraus

In this paper, we consider a generalized longest common subsequence problem, the string-excluding constrained LCS problem. For the two input sequences $X$ and $Y$ of lengths $n$ and $m$, and a constraint string $P$ of length $r$, the…

Data Structures and Algorithms · Computer Science 2013-01-31 Lei Wang , Xiaodong Wang , Yingjie Wu , Daxin Zhu

In this work, we consider a variant of the classical Longest Common Subsequence problem called Doubly-Constrained Longest Common Subsequence (DC-LCS). Given two strings s1 and s2 over an alphabet A, a set C_s of strings, and a function Co…

Data Structures and Algorithms · Computer Science 2013-11-20 Paola Bonizzoni , Gianluca Della Vedova , Riccardo Dondi , Yuri Pirola

The length of the longest common subsequences (LCSs) is often used as a similarity measurement to compare two (or more) random words. Below we study its statistical behavior in mean and variance using a Monte-Carlo approach from which we…

Probability · Mathematics 2017-05-22 Qingqing Liu , Christian Houdré

Classic similarity measures of strings are longest common subsequence and Levenshtein distance (i.e., the classic edit distance). A classic similarity measure of curves is dynamic time warping. These measures can be computed by simple…

Computational Complexity · Computer Science 2015-04-06 Karl Bringmann , Marvin Künnemann

The Longest Common Increasing Subsequence problem (LCIS) is a natural variant of the celebrated Longest Common Subsequence (LCS) problem. For LCIS, as well as for LCS, there is an $O(n^2)$-time algorithm and a SETH-based conditional lower…

Data Structures and Algorithms · Computer Science 2020-01-31 Lech Duraj

The Longest Common Substring (LCS) and Longest Palindromic Substring (LPS) are classical problems in computer science, representing fundamental challenges in string processing. Both problems can be solved in linear time using a classical…

Data Structures and Algorithms · Computer Science 2023-09-06 Domenico Cantone , Simone Faro , Arianna Pavone , Caterina Viola

Maximal Common Subsequences (MCSs) between two strings X and Y are subsequences of both X and Y that are maximal under inclusion. MCSs relax and generalize the well known and widely used concept of Longest Common Subsequences (LCSs), which…

Data Structures and Algorithms · Computer Science 2023-07-26 Alessio Conte , Roberto Grossi , Giulia Punzi , Takeaki Uno

A repetition free Longest Common Subsequence (LCS) of two sequences x and y is an LCS of x and y where each symbol may appear at most once. Let R denote the length of a repetition free LCS of two sequences of n symbols each one chosen…

Combinatorics · Mathematics 2013-05-22 Marcos Kiwi , Cristina G. Fernandes

In this paper, we consider a generalized longest common subsequence problem with multiple substring exclusion constrains. For the two input sequences $X$ and $Y$ of lengths $n$ and $m$, and a set of $d$ constrains $P=\{P_1,...,P_d\}$ of…

Data Structures and Algorithms · Computer Science 2013-03-11 Lei Wang , Xiaodong Wang , Yingjie Wu , Daxin Zhu

The longest square subsequence (LSS) problem consists of computing a longest subsequence of a given string $S$ that is a square, i.e., a longest subsequence of form $XX$ appearing in $S$. It is known that an LSS of a string $S$ of length…

Data Structures and Algorithms · Computer Science 2020-07-30 Takafumi Inoue , Shunsuke Inenaga , Hideo Bannai

In this note, we first introduce a new problem called the longest common subsequence and substring problem. Let $X$ and $Y$ be two strings over an alphabet $\Sigma$. The longest common subsequence and substring problem for $X$ and $Y$ is to…

Data Structures and Algorithms · Computer Science 2023-08-03 R. Li , J. Deka , K. Deka

We study quantum algorithms for several fundamental string problems, including Longest Common Substring, Lexicographically Minimal String Rotation, and Longest Square Substring. These problems have been widely studied in the stringology…

Data Structures and Algorithms · Computer Science 2021-10-22 Shyan Akmal , Ce Jin

At CPM 2017, Castelli et al. define and study a new variant of the Longest Common Subsequence Problem, termed the Longest Filled Common Subsequence Problem (LFCS). For the LFCS problem, the input consists of two strings $A$ and $B$ and a…

Data Structures and Algorithms · Computer Science 2019-08-06 Radu Stefan Mincu , Alexandru Popa

A longest common extension (LCE) query on a string computes the length of the longest common suffix or prefix at two given positions. A dynamic LCE algorithm maintains a data structure that allows efficient LCE queries on a string that can…

Data Structures and Algorithms · Computer Science 2026-04-15 Daniel Albert

In the Shortest Common Superstring (SCS) problem, one is given a collection of strings, and needs to find a shortest string containing each of them as a substring. SCS admits $2\frac{11}{23}$-approximation in polynomial time (Mucha,…

Data Structures and Algorithms · Computer Science 2020-06-05 Alexander Golovnev , Alexander S. Kulikov , Alexander Logunov , Ivan Mihajlin , Maksim Nikolaev

Given $m$ documents of total length $n$, we consider the problem of finding a longest string common to at least $d \geq 2$ of the documents. This problem is known as the \emph{longest common substring (LCS) problem} and has a classic $O(n)$…

Data Structures and Algorithms · Computer Science 2014-07-03 Tomasz Kociumaka , Tatiana Starikovskaya , Hjalte Wedel Vildhøj

The {\em longest common subsequence (LCS)} problem is a classic and well-studied problem in computer science. Palindrome is a word which reads the same forward as it does backward. The {\em longest common palindromic subsequence (LCPS)}…

Data Structures and Algorithms · Computer Science 2011-10-25 Shihabur Rahman Chowdhury , Md. Mahbubul Hasan , Sumaiya Iqbal , M. Sohel Rahman

The Longest Common Increasing Subsequence (LCIS) is a variant of the classical Longest Common Subsequence (LCS), in which we additionally require the common subsequence to be strictly increasing. While the well-known "Four Russians"…

Data Structures and Algorithms · Computer Science 2020-03-31 Anadi Agrawal , Paweł Gawrychowski

In this paper, we consider a generalized longest common subsequence problem with multiple substring inclusive constraints. For the two input sequences $X$ and $Y$ of lengths $n$ and $m$, and a set of $d$ constraints $P=\{P_1,\cdots,P_d\}$…

Data Structures and Algorithms · Computer Science 2015-05-26 Daxin Zhu , Lei Wang , Yingjie Wu , Xiaodong Wang