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200 papers

The decreasing costs and increasing speed and accuracy of DNA sample collection, preparation, and sequencing has rapidly produced an enormous volume of genetic data. However, fast and accurate analysis of the samples remains a bottleneck.…

Quantitative Methods · Quantitative Biology 2017-04-13 Stephanie Dodson , Darrell O. Ricke , Jeremy Kepner , Nelson Chiu , Anna Shcherbina

The challenge of automatically determining the correctness of test executions is referred to as the test oracle problem and is one of the key remaining issues for automated testing. The goal in this paper is to solve the test oracle problem…

Software Engineering · Computer Science 2023-10-03 Foivos Tsimpourlas , Ajitha Rajan , Miltiadis Allamanis

Through exploiting a high level of parallelism enabled by graphics processing units, transformer architectures have enabled tremendous strides forward in the field of natural language processing. In a traditional masked language model,…

Computation and Language · Computer Science 2023-03-29 Muhammed Shahir Abdurrahman , Hashem Elezabi , Bruce Changlong Xu

Large language model agents are increasingly expected to perform operational work: calling APIs, manipulating files, assembling workflows, and acting inside enterprise systems. Yet the tool layer on which this execution depends is still…

Software Engineering · Computer Science 2026-05-28 Swanand Rao

This paper describes the application of a high-level language and method in developing simpler specifications of more complex variants of the Paxos algorithm for distributed consensus. The specifications are for Multi-Paxos with preemption,…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-12-25 Yanhong A. Liu , Saksham Chand , Scott D. Stoller

Responsible AI design is increasingly seen as an imperative by both AI developers and AI compliance experts. One of the key tasks is envisioning AI technology uses and risks. Recent studies on the model and data cards reveal that AI…

Human-Computer Interaction · Computer Science 2024-07-18 Viviane Herdel , Sanja Šćepanović , Edyta Bogucka , Daniele Quercia

The rapid advancement of large language models, such as the Generative Pre-trained Transformer (GPT) series, has had significant implications across various disciplines. In this study, we investigate the potential of the state-of-the-art…

Computation and Language · Computer Science 2023-09-06 Yunhao Yang , Anshul Tomar

It is time-consuming and error-prone to implement inference procedures for each new probabilistic model. Probabilistic programming addresses this problem by allowing a user to specify the model and having a compiler automatically generate…

Deep Audio Analyzer is an open source speech framework that aims to simplify the research and the development process of neural speech processing pipelines, allowing users to conceive, compare and share results in a fast and reproducible…

Sound · Computer Science 2023-10-31 Valerio Francesco Puglisi , Oliver Giudice , Sebastiano Battiato

We present POPACheck, the first model checking tool for probabilistic Pushdown Automata (pPDA) supporting temporal logic specifications. POPACheck provides a user-friendly probabilistic modeling language with recursion that automatically…

Logic in Computer Science · Computer Science 2025-06-05 Francesco Pontiggia , Ezio Bartocci , Michele Chiari

This article examines the use of the Prolog language for writing verification, analysis and transformation tools. Guided by experience in teaching and the development of verification tools like ProB or specialisation tools like ECCE and…

Programming Languages · Computer Science 2020-08-10 Michael Leuschel

Implementing automated unit tests is an important but time-consuming activity in software development. To assist developers in this task, many techniques for automating unit test generation have been developed. However, despite this effort,…

Software Engineering · Computer Science 2025-01-16 Rangeet Pan , Myeongsoo Kim , Rahul Krishna , Raju Pavuluri , Saurabh Sinha

External tool integration through function-calling is essential for practical language model applications, yet most multilingual models lack reliable tool-use capabilities in non-English languages. Even state-of-the-art multilingual models…

Information Retrieval · Computer Science 2025-07-01 Simeon Emanuilov

Traditional fixed test sets fall short in evaluating open-ended capabilities of foundation models. To address this, we propose ONEBench(OpeN-Ended Benchmarking), a new testing paradigm that consolidates individual evaluation datasets into a…

Machine Learning · Computer Science 2025-06-18 Adhiraj Ghosh , Sebastian Dziadzio , Ameya Prabhu , Vishaal Udandarao , Samuel Albanie , Matthias Bethge

Large Language Models (LLMs) and Multi-Agent LLMs (MALLMs) introduce non-determinism unlike traditional or machine learning software, requiring new approaches to verifying correctness beyond simple output comparisons or statistical accuracy…

Software Engineering · Computer Science 2025-10-22 Felix Dobslaw , Robert Feldt , Juyeon Yoon , Shin Yoo

The Herzberg Extensible Adaptive optics Real-Time Toolkit (HEART) is a complete framework written in C and Python for building next-generation adaptive optics (AO) system real-time controllers, with the performance needed for extremely…

Instrumentation and Methods for Astrophysics · Physics 2024-12-25 Edward L. Chapin , Jennifer Dunn , Dan Kerley , Lianne Mueller , Malcolm Smith , Jonathan Stocks

Large Language Models (LLMs) are widely adopted for assisting in software development tasks, yet their performance evaluations have narrowly focused on the functional correctness of generated code. Human programmers, however, require…

Software Engineering · Computer Science 2024-12-06 Yun Peng , Akhilesh Deepak Gotmare , Michael Lyu , Caiming Xiong , Silvio Savarese , Doyen Sahoo

LLM-based code interpreter agents are increasingly deployed in critical workflows, yet their robustness against risks introduced by their code execution capabilities remains underexplored. Existing benchmarks are limited to static datasets…

Cryptography and Security · Computer Science 2026-02-24 Lei Ba , Qinbin Li , Songze Li

We train one multilingual model for dependency parsing and use it to parse sentences in several languages. The parsing model uses (i) multilingual word clusters and embeddings; (ii) token-level language information; and (iii)…

Computation and Language · Computer Science 2016-07-27 Waleed Ammar , George Mulcaire , Miguel Ballesteros , Chris Dyer , Noah A. Smith

We present StepFun-Prover Preview, a large language model designed for formal theorem proving through tool-integrated reasoning. Using a reinforcement learning pipeline that incorporates tool-based interactions, StepFun-Prover can achieve…

Artificial Intelligence · Computer Science 2025-08-14 Shijie Shang , Ruosi Wan , Yue Peng , Yutong Wu , Xiong-hui Chen , Jie Yan , Xiangyu Zhang