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This paper leverages the framework of algorithms-with-predictions to design data structures for two fundamental dynamic graph problems: incremental topological ordering and cycle detection. In these problems, the input is a directed graph…

Data Structures and Algorithms · Computer Science 2024-02-20 Samuel McCauley , Benjamin Moseley , Aidin Niaparast , Shikha Singh

Topological Neural Networks (TNNs) incorporate higher-order relational information beyond pairwise interactions, enabling richer representations than Graph Neural Networks (GNNs). Concurrently, topological descriptors based on persistent…

Machine Learning · Computer Science 2024-06-06 Yogesh Verma , Amauri H Souza , Vikas Garg

Network science provides valuable insights across numerous disciplines including sociology, biology, neuroscience and engineering. A task of major practical importance in these application domains is inferring the network structure from…

Machine Learning · Computer Science 2019-05-01 Vassilis N. Ioannidis , Yanning Shen , Georgios B. Giannakis

Graph neural networks (GNNs) have emerged as a powerful tool for graph classification and representation learning. However, GNNs tend to suffer from over-smoothing problems and are vulnerable to graph perturbations. To address these…

Machine Learning · Computer Science 2021-11-01 Yuzhou Chen , Baris Coskunuzer , Yulia R. Gel

Emergent hydrodynamics (EHD) bridges short-time unitarity with late-time thermodynamics, universal transport phenomena characterize the manner and speed of transport and thermalization. Typical non-integrable systems with few conserved…

Disordered Systems and Neural Networks · Physics 2025-10-23 Andrew Stasiuk , Garrett Heller , Lance Berkey , Bo Xing , Paola Cappellaro

Time-varying connections are crucial in understanding the structures and dynamics of complex networks. In this paper, we propose a continuous-time switching topology model for temporal networks that is driven by bursty behavior and study…

Physics and Society · Physics 2025-05-21 Ziyan Zeng , Minyu Feng , Matjaž Perc , Jürgen Kurths

Graphical models capture relations between entities in a wide range of applications including social networks, biology, and natural language processing, among others. Graph neural networks (GNN) are neural models that operate over graphs,…

Machine Learning · Computer Science 2024-02-08 Xu Zheng , Farhad Shirani , Tianchun Wang , Shouwei Gao , Wenqian Dong , Wei Cheng , Dongsheng Luo

We analyse a collection of empirical networks in a wide spectrum of disciplines and show that strong non-normality is ubiquitous in network science. Dynamical processes evolving on non-normal networks exhibit a peculiar behaviour, as…

Adaptation and Self-Organizing Systems · Physics 2018-11-09 Malbor Asllani , Renaud Lambiotte , Timoteo Carletti

In this work, the topologies of networks constructed from time series from an underlying system undergo a period doubling cascade have been explored by means of the prevalence of different motifs using an efficient computational motif…

Chaotic Dynamics · Physics 2014-06-19 Ruoxi Xiang , Michael Small

To observe synchronization in a large network of classical or quantum systems demands both excellent control of the interactions between the nodes and very accurate preparation of the initial conditions due to the involved nonlinearities…

Quantum Physics · Physics 2023-04-14 Christopher W. Wächtler , Gloria Platero

Many real life networks present an average path length logarithmic with the number of nodes and a degree distribution which follows a power law. Often these networks have also a modular and self-similar structure and, in some cases -…

Physics and Society · Physics 2010-02-17 Alicia Miralles , Francesc Comellas , Lichao Chen , Zhongzhi Zhang

We present and analyze a topologically induced transition from ordered, synchronized to disordered dynamics in directed networks of oscillators. The analysis reveals where in the space of networks this transition occurs and its underlying…

Disordered Systems and Neural Networks · Physics 2007-05-23 Marc Timme

Here we consider the topological properties of the integrated networks emerging from the activity driven model [Perra at al. Sci. Rep. 2, 469 (2012)], a temporal network model recently proposed to explain the power-law degree distribution…

Statistical Mechanics · Physics 2015-06-15 Michele Starnini , Romualdo Pastor Satorras

The recent discovery of universal principles underlying many complex networks occurring across a wide range of length scales in the biological world has spurred physicists in trying to understand such features using techniques from…

Biological Physics · Physics 2015-05-13 Sitabhra Sinha

Detecting anomalous subgraphs in a dynamic graph in an online or streaming fashion is an important requirement in industrial settings for intrusion detection or denial of service attacks. While only detecting anomalousness in the system by…

Social and Information Networks · Computer Science 2021-12-01 Prateek Chanda , Aadirupa Saha

Temporal information is increasingly available as part of large network data sets. This information reveals sequences of link activations between network entities, which can expose underlying processes in the data. Examples include the…

Social and Information Networks · Computer Science 2016-05-10 Ursula Redmond , Pádraig Cunningham

Graphs are essential representations of many real-world data such as social networks. Recent years have witnessed the increasing efforts made to extend the neural network models to graph-structured data. These methods, which are usually…

Machine Learning · Computer Science 2018-11-07 Yao Ma , Ziyi Guo , Zhaochun Ren , Eric Zhao , Jiliang Tang , Dawei Yin

Despite the extensive studies of topological states, their characterization in strongly nonlinear classical systems has been lacking. In this work, we identify the proper definition of Berry phase for nonlinear bulk modes and characterize…

Disordered Systems and Neural Networks · Physics 2022-06-22 Di Zhou , D. Zeb Rocklin , Michael Leamy , Yugui Yao

Topological lasers and random lasers embody two contrasting strategies for disorder management in photonics: the former suppresses disorder via protected edge transport, while the latter exploits multiple scattering for feedback. Here, we…

Optics · Physics 2026-04-06 Hang-Zheng Shen , Xian-Hao Wei , Xi-Wang Luo , Zheng-Wei Zhou

State Estimation is a crucial task in power systems. Graph Neural Networks have demonstrated significant potential in state estimation for power systems by effectively analyzing measurement data and capturing the complex interactions and…

Signal Processing · Electrical Eng. & Systems 2024-10-22 Seyed Hamed Haghshenas , Mia Naeini