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Learning the continuous dynamics of a system from snapshots of its temporal marginals is a problem which appears throughout natural sciences and machine learning, including in quantum systems, single-cell biological data, and generative…

Machine Learning · Computer Science 2023-06-12 Kirill Neklyudov , Rob Brekelmans , Daniel Severo , Alireza Makhzani

Coupled learning is a contrastive scheme for tuning the properties of individual elements within a network in order to achieve desired functionality of the system. It takes advantage of physics both to learn using local rules and to…

Soft Condensed Matter · Physics 2024-07-09 Lauren E. Altman , Menachem Stern , Andrea J. Liu , Douglas J. Durian

Reservoir Computing has found many potential applications in the field of complex dynamics. In this article, we exploit the exceptional capability of the echo-state network (ESN) model to make it learn a unidirectional coupling scheme from…

Machine Learning · Computer Science 2023-06-21 Swarnendu Mandal , Manish Dev Shrimali

We show that a neural network originally designed for language processing can learn the dynamical rules of a stochastic system by observation of a single dynamical trajectory of the system, and can accurately predict its emergent behavior…

Statistical Mechanics · Physics 2022-02-18 Corneel Casert , Isaac Tamblyn , Stephen Whitelam

In a complex system, the interactions between individual agents often lead to emergent collective behavior like spontaneous synchronization, swarming, and pattern formation. The topology of the network of interactions can have a dramatic…

Adaptation and Self-Organizing Systems · Physics 2022-07-25 Mark J Panaggio , Maria-Veronica Ciocanel , Lauren Lazarus , Chad M Topaz , Bin Xu

We consider the structure learning problem for graphical models that we call loosely connected Markov random fields, in which the number of short paths between any pair of nodes is small, and present a new conditional independence test…

Machine Learning · Statistics 2014-02-05 Rui Wu , R. Srikant , Jian Ni

Machine learning techniques not only offer efficient tools for modelling dynamical systems from data, but can also be employed as frontline investigative instruments for the underlying physics. Nontrivial information about the original…

Data Analysis, Statistics and Probability · Physics 2021-02-24 Francesco Borra , Marco Baldovin

Importance sampling of trajectories has proved a uniquely successful strategy for exploring rare dynamical behaviors of complex systems in an unbiased way. Carrying out this sampling, however, requires an ability to propose changes to…

Statistical Mechanics · Physics 2015-07-01 Todd R. Gingrich , Phillip L. Geissler

The behaviour of many real-world phenomena can be modelled by nonlinear dynamical systems whereby a latent system state is observed through a filter. We are interested in interacting subsystems of this form, which we model by a set of…

Machine Learning · Computer Science 2017-02-20 Oliver M. Cliff , Mikhail Prokopenko , Robert Fitch

Machine learning methods have shown promise in learning chaotic dynamical systems, enabling model-free short-term prediction and attractor reconstruction. However, when applied to large-scale, spatiotemporally chaotic systems, purely…

Chaotic Dynamics · Physics 2026-01-09 Kuei-Jan Chu , Nozomi Akashi , Akihiro Yamamoto

The molecular evolution in a gene regulatory network is classically modeled by Markov jump processes. However, the direct simulation of such models is extremely time consuming. Indeed, even the simplest Markovian model, such as the…

Probability · Mathematics 2012-11-30 Aurélie Muller-Gueudin

Given a valued graph, where both the nodes and the edges of the graph are associated with one or several values, any network function for a given node must be defined in terms of that node and its connected nodes in the graph. Generally,…

Social and Information Networks · Computer Science 2022-09-16 Li-Chun Zhang

Perfect sampling is a technique that uses coupling arguments to provide a sample from the stationary distribution of a Markov chain in a finite time without ever computing the distribution. This technique is very efficient if all the events…

Discrete Mathematics · Computer Science 2015-03-17 Ana Bušić , Bruno Gaujal , Furcy Pin

The dynamics of systems of interacting agents is determined by the structure of their coupling network. The knowledge of the latter is, therefore, highly desirable, for instance, to develop efficient control schemes, to accurately predict…

Adaptation and Self-Organizing Systems · Physics 2021-10-13 Melvyn Tyloo , Robin Delabays , Philippe Jacquod

We study synchronization and consensus in a group of dynamical systems coupled via multiple directed networks. We show that even though the coupling in a single network may not be sufficient to synchronize the systems, combination of…

Systems and Control · Electrical Eng. & Systems 2021-05-07 Chai Wah Wu

We study the limiting behavior of a random dynamic system driven by a stochastic chain. Our main interest is in the chains that are not necessarily ergodic but rather decomposable into ergodic classes. To investigate the conditions under…

Dynamical Systems · Mathematics 2011-02-02 Behrouz Touri , Angelia Nedi'c

We study expanding circle maps interacting in a heterogeneous random network. Heterogeneity means that some nodes in the network are massively connected, while the remaining nodes are only poorly connected. We provide a probabilistic…

Dynamical Systems · Mathematics 2013-08-27 Tiago Pereira , Sebastian van Strien , Jeroen S. W. Lamb

This work examines the problem of topology inference over discrete-time nonlinear stochastic networked dynamical systems. The goal is to recover the underlying digraph linking the network agents, from observations of their state-evolution.…

Multiagent Systems · Computer Science 2019-06-24 Augusto Santos , Vincenzo Matta , Ali H. Sayed

It is well established that gene expression can be modeled as a Markovian stochastic process and hence proper observables might be subjected to large fluctuations and rare events. Since dynamics is often more than statics, one can work with…

Biological Physics · Physics 2019-09-11 Pegah Torkaman , Farhad H. Jafarpour

In the process of building (structural learning) a probabilistic graphical model from a set of observed data, the directional, cyclic dependencies between the random variables of the model are often found. Existing graphical models such as…

Machine Learning · Computer Science 2023-10-26 Oleksii Sirotkin
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