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One-dimensional persistent homology is arguably the most important and heavily used computational tool in topological data analysis. Additional information can be extracted from datasets by studying multi-dimensional persistence modules and…

Algebraic Topology · Mathematics 2023-08-31 Facundo Mémoli , Anastasios Stefanou , Ling Zhou

Throughout this paper, a persistence diagram ${\cal P}$ is composed of a set $P$ of planar points (each corresponding to a topological feature) above the line $Y=X$, as well as the line $Y=X$ itself, i.e., ${\cal P}=P\cup\{(x,y)|y=x\}$.…

Computational Geometry · Computer Science 2020-02-11 Yuya Higashikawa , Naoki Katoh , Guohui Lin , Eiji Miyano , Suguru Tamaki , Junichi Teruyama , Binhai Zhu

In topological data analysis, we want to discern topological and geometric structure of data, and to understand whether or not certain features of data are significant as opposed to simply random noise. While progress has been made on…

Computational Geometry · Computer Science 2020-01-10 So Mang Han , Taylor Okonek , Nikesh Yadav , Xiaojun Zheng

Mixed-dimensional partial differential equations arise in several physical applications, wherein parts of the domain have extreme aspect ratios. In this case, it is often appealing to model these features as lower-dimensional manifolds…

Analysis of PDEs · Mathematics 2017-05-22 J. M. Nordbotten , W. M. Boon

A fundamental challenge in multiparameter persistent homology is the absence of a complete and discrete invariant. To address this issue, we propose an enhanced framework that realizes a holistic understanding of a fully commutative…

Algebraic Topology · Mathematics 2023-11-14 Yasuaki Hiraoka , Ken Nakashima , Ippei Obayashi , Chenguang Xu

This paper develops the idea of homology for 1-parameter families of topological spaces. We express parametrized homology as a collection of real intervals with each corresponding to a homological feature supported over that interval or,…

Algebraic Topology · Mathematics 2019-03-20 Gunnar Carlsson , Vin de Silva , Sara Kalisnik , Dmitriy Morozov

This paper is a survey of persistent homology, primarily as it is used in topological data analysis. It includes the theory of persistence modules, as well as stability theorems for persistence barcodes, generalized persistence,…

Algebraic Topology · Mathematics 2020-04-03 Gunnar Carlsson

Let k be a field, let A a finite-dimensional hereditary k-algebra. We consider the category of all finite-dimensional A-modules. We are going to characterize the representation type of A (tame or wild) in terms of the possible subcategories…

Representation Theory · Mathematics 2014-07-22 Mustafa A. A. Obaid , S. Khalid Nauman , Wafaa M. Fakieh , Claus Michael Ringel

Many systems in biology, physics and engineering can be described by systems of ordinary differential equation containing many parameters. When studying the dynamic behavior of these large, nonlinear systems, it is useful to identify and…

Molecular Networks · Quantitative Biology 2016-04-13 Heather A. Harrington , Dhagash Mehta , Helen M. Byrne , Jonathan D. Hauenstein

It is known that for a variety of choices of metrics, including the standard bottleneck distance, the space of persistence diagrams admits geodesics. Typically these existence results produce geodesics that have the form of a convex…

Metric Geometry · Mathematics 2019-05-28 Samir Chowdhury

The stability of persistent homology has led to wide applications of the persistence diagram as a trusted topological descriptor in the presence of noise. However, with the increasing demand for high-dimension and low-sample-size data…

Statistics Theory · Mathematics 2025-11-04 Yasuaki Hiraoka , Yusuke Imoto , Shu Kanazawa , Enhao Liu

We show that macro-molecular self-assembly can recognize and classify high-dimensional patterns in the concentrations of $N$ distinct molecular species. Similar to associative neural networks, the recognition here leverages dynamical…

Disordered Systems and Neural Networks · Physics 2017-04-26 Weishun Zhong , David J. Schwab , Arvind Murugan

This article consists in two independent parts. In the first one, we investigate the geometric properties of almost periodicity of model sets (or cut-and-project sets, defined under the weakest hypotheses); in particular we show that they…

Dynamical Systems · Mathematics 2015-12-03 Pierre-Antoine Guihéneuf

In recent years, persistence modules have been viewed as graded modules with gradation over a preordered set serving as the indexing set. We provide sufficient criteria for a projective module over a PID to be free when the indexing set is…

Algebraic Topology · Mathematics 2026-03-04 Prateep Chakraborty , Giriraj Ghosh

In this paper we introduce the persistent magnitude, a new numerical invariant of (sufficiently nice) graded persistence modules. It is a weighted and signed count of the bars of the persistence module, in which a bar of the form $[a,b)$ in…

Algebraic Topology · Mathematics 2022-04-25 Dejan Govc , Richard Hepworth

We define a class of invariants, which we call homological invariants, for persistence modules over a finite poset. Informally, a homological invariant is one that respects some homological data and takes values in the free abelian group…

Algebraic Topology · Mathematics 2024-08-26 Benjamin Blanchette , Thomas Brüstle , Eric J. Hanson

Persistence diagrams, which summarize the birth and death of homological features extracted from data, are employed as stable signatures for applications in image analysis and other areas. Besides simply considering the multiset of…

Computational Geometry · Computer Science 2018-10-16 Tamal K. Dey , Tao Hou , Sayan Mandal

Persistent homology studies the birth and death of cycles in a parameterized family of spaces. In this paper, we study the birth and death of cycles in a multifiltration of a chain complex with the goal of producing a persistence diagram…

Algebraic Topology · Mathematics 2021-07-07 Alex McCleary , Amit Patel

The persistence diagram is a central object in the study of persistent homology and has also been investigated in the context of random topology. The more recent notion of the verbose diagram (a.k.a. verbose barcode) is a refinement of the…

Algebraic Topology · Mathematics 2025-09-29 Jeong-hwi Joe , Woojin Kim , Cheolwoo Park

The $\gamma$-linear projected barcode was recently introduced as an alternative to the well-known fibered barcode for multiparameter persistence, in which restrictions of the modules to lines are replaced by pushforwards of the modules…

Algebraic Topology · Mathematics 2024-08-05 Alex Fernandes , Steve Oudot , Francois Petit