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Graph neural networks (GNN) are an effective framework that exploit inter-relationships within graph-structured data for learning. Principal component analysis (PCA) involves the projection of data on the eigenspace of the covariance matrix…

Machine Learning · Computer Science 2023-01-18 Saurabh Sihag , Gonzalo Mateos , Corey McMillan , Alejandro Ribeiro

We consider the problem of decomposing a large covariance matrix into the sum of a low-rank matrix and a diagonally dominant matrix, and we call this problem the "Diagonally-Dominant Principal Component Analysis (DD-PCA)". DD-PCA is an…

Methodology · Statistics 2019-06-04 Zheng Tracy Ke , Lingzhou Xue , Fan Yang

We outline how principal component analysis (PCA) can be applied to particle configuration data to detect a variety of phase transitions in off-lattice systems, both in and out of equilibrium. Specifically, we discuss its application to…

Computational Physics · Physics 2018-12-07 R. B. Jadrich , B. A. Lindquist , W. D. Pineros , D. Banerjee , T. M. Truskett

Deep equilibrium models (DEQs), as a typical implicit neural network, have demonstrated remarkable success on various tasks. There is, however, a lack of theoretical understanding of the connections and differences between implicit DEQs and…

Machine Learning · Computer Science 2024-05-21 Zenan Ling , Longbo Li , Zhanbo Feng , Yixuan Zhang , Feng Zhou , Robert C. Qiu , Zhenyu Liao

Principal component analysis is an important pattern recognition and dimensionality reduction tool in many applications. Principal components are computed as eigenvectors of a maximum likelihood covariance $\widehat{\Sigma}$ that…

Statistics Theory · Mathematics 2017-10-30 Raphael Hauser , Raul Kangro , Jüri Lember , Heinrich Matzinger

Principal Component Analysis (PCA) is applied to the residuals of six widely used nuclear mass models to uncover systematic deviations and identify missing physical effects in theoretical nuclear mass predictions. By analyzing the principal…

Nuclear Theory · Physics 2026-03-03 Y. Y. Huang , X. H. Wu

Due to the rapid growth of smart agents such as weakly connected computational nodes and sensors, developing decentralized algorithms that can perform computations on local agents becomes a major research direction. This paper considers the…

Machine Learning · Computer Science 2021-02-09 Haishan Ye , Tong Zhang

When working with large biological data sets, exploratory analysis is an important first step for understanding the latent structure and for generating hypotheses to be tested in subsequent analyses. However, when the number of variables is…

Methodology · Statistics 2017-02-03 Julia Fukuyama

Principal component analysis (PCA) is perhaps the most widely used method for data dimensionality reduction. A key question in PCA is deciding how many factors to retain. This manuscript describes a new approach to automatically selecting…

Methodology · Statistics 2026-02-10 Enes Makalic , Daniel F. Schmidt

We study attention mechanisms through the lens of a canonical unsupervised problem: principal component analysis (PCA). We show that, when trained on Gaussian data, both softmax and linear attention layers learn parameters that align with…

Optimization and Control · Mathematics 2026-05-19 Rodrigo Maulen-Soto , Claire Boyer

Deep Equilibrium Models (DEQs) are a class of implicit neural networks that solve for a fixed point of a neural network in their forward pass. Traditionally, DEQs take sequences as inputs, but have since been applied to a variety of data.…

Machine Learning · Computer Science 2025-03-25 Jonathan Geuter , Clément Bonet , Anna Korba , David Alvarez-Melis

Principal component analysis (PCA) is often used for analyzing data in the most diverse areas. In this work, we report an integrated approach to several theoretical and practical aspects of PCA. We start by providing, in an intuitive and…

Computational Engineering, Finance, and Science · Computer Science 2021-06-09 Felipe L. Gewers , Gustavo R. Ferreira , Henrique F. de Arruda , Filipi N. Silva , Cesar H. Comin , Diego R. Amancio , Luciano da F. Costa

Exploratory factor analysis (EFA) is useful to identify the number and mapping of the hidden factors that could dominantly represent the features in the dataset. Principal component analysis (PCA) is the first step as part of the two-step…

Social and Information Networks · Computer Science 2024-03-07 Natarajan Meghanathan

This is a tutorial and survey paper on factor analysis, probabilistic Principal Component Analysis (PCA), variational inference, and Variational Autoencoder (VAE). These methods, which are tightly related, are dimensionality reduction and…

Machine Learning · Statistics 2022-05-25 Benyamin Ghojogh , Ali Ghodsi , Fakhri Karray , Mark Crowley

The current understanding of deep neural networks can only partially explain how input structure, network parameters and optimization algorithms jointly contribute to achieve the strong generalization power that is typically observed in…

Machine Learning · Computer Science 2021-01-28 Francesco Craighero , Fabrizio Angaroni , Alex Graudenzi , Fabio Stella , Marco Antoniotti

Big data is transforming our world, revolutionizing operations and analytics everywhere, from financial engineering to biomedical sciences. The complexity of big data often makes dimension reduction techniques necessary before conducting…

Methodology · Statistics 2018-01-08 Jianqing Fan , Qiang Sun , Wen-Xin Zhou , Ziwei Zhu

Autoencoders and generative models produce some of the most spectacular deep learning results to date. However, understanding and controlling the latent space of these models presents a considerable challenge. Drawing inspiration from…

Computer Vision and Pattern Recognition · Computer Science 2020-06-16 Chi-Hieu Pham , Saïd Ladjal , Alasdair Newson

We generalize the low-rank decomposition problem, such as principal and independent component analysis (PCA, ICA) for continuous-time vector-valued signals and provide a model-agnostic implicit neural signal representation framework to…

Machine Learning · Computer Science 2025-07-15 Shayan K. Azmoodeh , Krishna Subramani , Paris Smaragdis

Continuous latent variables (LVs) are a key ingredient of many generative models, as they allow modelling expressive mixtures with an uncountable number of components. In contrast, probabilistic circuits (PCs) are hierarchical discrete…

Machine Learning · Computer Science 2023-10-27 Gennaro Gala , Cassio de Campos , Robert Peharz , Antonio Vergari , Erik Quaeghebeur

End-to-end deep neural networks have achieved remarkable success across various domains but are often criticized for their lack of interpretability. While post hoc explanation methods attempt to address this issue, they often fail to…

Machine Learning · Computer Science 2025-01-22 Weixin Chen , Simon Yu , Huajie Shao , Lui Sha , Han Zhao
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