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Different molecular dynamics methods like the direct method, the Green-Kubo (GK) method and homogeneous non-equilibrium molecular dynamics (HNEMD) method have been widely used to calculate lattice thermal conductivity ($\kappa_\ell$). While…

Materials Science · Physics 2017-06-02 Bonny Dongre , Tao Wang , Georg K. H. Madsen

This paper proposes a new Helmholtz decomposition based windowed Green function (HD-WGF) method for solving the time-harmonic elastic scattering problems on a half-space with Dirichlet boundary conditions in both 2D and 3D. The Helmholtz…

Computational Physics · Physics 2023-12-27 Tao Yin , Lu Zhang , Weiying Zheng , Xiaopeng Zhu

Dynamic mode decomposition (DMD) is a recently developed tool for the analysis of the behavior of complex dynamical systems. In this paper, we will propose an extension of DMD that exploits low-rank tensor decompositions of potentially…

Numerical Analysis · Mathematics 2019-08-14 Stefan Klus , Patrick Gelß , Sebastian Peitz , Christof Schütte

Nonequilibrium heat transport in quantum systems coupled to wide-band embeddings provides a striking example of the limitations of the generalized Kadanoff-Baym ansatz (GKBA), while solving the full two-time Kadanoff-Baym equations remains…

Mesoscale and Nanoscale Physics · Physics 2025-02-10 Yaroslav Pavlyukh , Riku Tuovinen

Simulations of interacting electrons and bosons out of equilibrium, starting from first principles and aiming at realistic multiscale scenarios, is a grand theoretical challenge. Here, using the formalism of nonequilibrium Green's functions…

Strongly Correlated Electrons · Physics 2022-04-06 Yaroslav Pavlyukh , Enrico Perfetto , Daniel Karlsson , Robert van Leeuwen , Gianluca Stefanucci

We analyze the methodology and the performance of subsystem density functional theory (DFT) with meta-generalized gradient approximation (meta-GGA) exchange-correlation functionals for non-bonded systems. Meta-GGA functionals depend on the…

Other Condensed Matter · Physics 2015-05-05 S. Śmiga , E. Fabiano , S. Laricchia , L. A. Constantin , F. Della Sala

The ultrafast hole dynamics triggered by the photoexcitation of molecular targets is a highly correlated process even for those systems, like organic molecules, having a weakly correlated ground state. We here provide a unifying framework…

Chemical Physics · Physics 2021-07-21 Yaroslav Pavlyukh , Enrico Perfetto , Gianluca Stefanucci

Graph Neural Networks (GNNs) have emerged as fundamental tools for a wide range of prediction tasks on graph-structured data. Recent studies have drawn analogies between GNN feature propagation and diffusion processes, which can be…

Machine Learning · Computer Science 2024-10-10 Dai Shi , Lequan Lin , Andi Han , Zhiyong Wang , Yi Guo , Junbin Gao

Benchmarks that span a broad swath of chemical space, such as GMTKN55, are very useful for assessing progress in the quest for more universal DFT functionals. We find that the WTMAD2 metrics for a great number of functionals show a clear…

Chemical Physics · Physics 2019-12-12 Golokesh Santra , Jan M. L. Martin

The theory of Self-Consistent Green's Function (SCGF) is reformulated in an explicit Nambu-covariant fashion for applications to many-body systems at non-zero temperature in symmetry-broken phases. This is achieved by extending the…

Nuclear Theory · Physics 2025-07-09 M. Drissi , A. Rios , C. Barbieri

In this thesis we showed that Non-equilibrium Green's Function Perturbation Theory (NEGF) is really the overarching perturbative transport theory. This is shown in great detail by using NEGF as a starting point and developing in 3…

Mesoscale and Nanoscale Physics · Physics 2013-02-05 Meng Lee Leek

The scientific computation methods development in conjunction with artificial intelligence technologies remains a hot research topic. Finding a balance between lightweight and accurate computations is a solid foundation for this direction.…

Machine Learning · Computer Science 2025-07-03 Nikita Sakovich , Dmitry Aksenov , Ekaterina Pleshakova , Sergey Gataullin

Dynamic equations for quantum fields far from equilibrium are derived by use of functional renormalisation group techniques. The obtained equations are non-perturbative and lead substantially beyond mean-field and quantum Boltzmann type…

Other Condensed Matter · Physics 2008-11-27 Thomas Gasenzer , Jan M. Pawlowski

We establish the convergence of a class of numerical algorithms, known as Dynamic Mode Decomposition (DMD), for computation of the eigenvalues and eigenfunctions of the infinite-dimensional Koopman operator. The algorithms act on data…

Dynamical Systems · Mathematics 2017-11-21 Hassan Arbabi , Igor Mezić

We introduce a new way to study molecular evolution within well-established Hamilton-Jacobi formalism, showing that for a broad class of fitness landscapes it is possible to derive dynamics analytically within the $1/N$-accuracy, where $N$…

Populations and Evolution · Quantitative Biology 2015-05-13 David B. Saakian , Olga Rozanova , Andrei Akmetzhanov

We have developed a time propagation scheme for the Kadanoff-Baym equations for general inhomogeneous systems. These equations describe the time evolution of the nonequilibrium Green function for interacting many-body systems in the…

Mesoscale and Nanoscale Physics · Physics 2015-05-13 Adrian Stan , Nils Erik Dahlen , Robert van Leeuwen

To explore whether the density-functional theory non-equilibrium Green's function formalism (DFT-NEGF) provides a rigorous framework for quantum transport, we carried out time-dependent density functional theory (TDDFT) calculations of the…

Materials Science · Physics 2011-07-01 ChiYung Yam , Xiao Zheng , GuanHua Chen , Yong Wang , Thomas Frauenheim , Thomas A. Niehaus

The dynamic mode decomposition (DMD) is a broadly applicable dimensionality reduction algorithm that approximates a matrix containing time-series data by the outer product of a matrix of exponentials, representing Fourier-like time…

Optimization and Control · Mathematics 2017-12-07 Travis Askham , Peng Zheng , Aleksandr Aravkin , J. Nathan Kutz

In many mechanical, electrical, and general physical systems evolving over time or space, spectral analysis methods as Fast Fourier Transform (FFT), Short Term Fourier Transform (STFT), Power Spectrum Density (PSD) plays a very important…

Signal Processing · Electrical Eng. & Systems 2023-06-21 Andreas Tuor , Nico Canzani , Tobias Rüggeberg , Stefan Gorenflo , Gerd Simons , Bruno Bättig , Daniel Iseli

The main goal of this paper is to put on solid mathematical grounds the so-called Non-Equilibrium Green's Function (NEGF) transport formalism for open systems. In particular, we derive the Jauho-Meir-Wingreen formula for the time-dependent…

Mathematical Physics · Physics 2017-12-12 H. D. Cornean , V. Moldoveanu , C. -A. Pillet