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Graphs are a basic tool for the representation of modern data. The richness of the topological information contained in a graph goes far beyond its mere interpretation as a one-dimensional simplicial complex. We show how topological…

Combinatorics · Mathematics 2018-10-11 Mattia G. Bergomi , Massimo Ferri , Lorenzo Zuffi

We show that the dominating set problem parameterized by solution size is fixed-parameter tractable (FPT) in graphs that do not contain the claw (K(1,3)), the complete bipartite graph on four vertices where the two parts have one and three…

Data Structures and Algorithms · Computer Science 2015-03-17 Marek Cygan , Geevarghese Philip , Marcin Pilipczuk , Michał Pilipczuk , Jakub Onufry Wojtaszczyk

Natural and man-made transport webs are frequently dominated by dense sets of nested cycles. The architecture of these networks, as defined by the topology and edge weights, determines how efficiently the networks perform their function.…

Quantitative Methods · Quantitative Biology 2016-07-27 Carl D. Modes , Marcelo O. Magnasco , Eleni Katifori

Discovering the underlying structures present in large real world graphs is a fundamental scientific problem. In this paper we show that a graph's clique tree can be used to extract a hyperedge replacement grammar. If we store an ordering…

Social and Information Networks · Computer Science 2016-08-11 Salvador Aguiñaga , Rodrigo Palacios , David Chiang , Tim Weninger

A set of edges $F$ in a graph $G$ is an edge dominating set if every edge in $G$ is either in $F$ or shares a vertex with an edge in $F$. $G$ is said to be well-edge-dominated if all of its minimal edge dominating sets have the same…

Combinatorics · Mathematics 2024-12-17 Jake Berg , Perryn Chang , Claire Kaneshiro , Kirsti Kuenzel , Ryan Pellico , Isabel Renteria , Sumi Vora

Data processing tasks over graphs couple the data residing over the nodes with the topology through graph signal processing tools. Graph filters are one such prominent tool, having been used in applications such as denoising, interpolation,…

Signal Processing · Electrical Eng. & Systems 2023-01-18 Bishwadeep Das , Elvin Isufi

It appeared recently that the classical random graph model used to represent real-world complex networks does not capture their main properties. Since then, various attempts have been made to provide accurate models. We study here a model…

Statistical Mechanics · Physics 2021-03-22 Jean-Loup Guillaume , Matthieu Latapy

Bipartite graphs have received some attention in the study of social networks and of biological mutualistic systems. A generalization of a previous model is presented, that evolves the topology of the graph in order to optimally account for…

Physics and Society · Physics 2009-11-13 Enrique Burgos , Horacio Ceva , Laura Hernandez , R. P. J. Perazzo , Mariano Devoto , Diego Medan

Graph clustering is an important algorithmic technique for analysing massive graphs, and has been widely applied in many research fields of data science. While the objective of most graph clustering algorithms is to find a vertex set of low…

Data Structures and Algorithms · Computer Science 2025-08-08 Joyentanuj Das , Suranjan De , He Sun

This paper introduces and demonstrates a computational pipeline for the statistical analysis of shape graph datasets, namely geometric networks embedded in 2D or 3D spaces. Unlike traditional abstract graphs, our purpose is not only to…

Machine Learning · Computer Science 2026-02-19 Murad Hossen , Demetrio Labate , Nicolas Charon

We demonstrate that graphs embedded on surfaces are a powerful and practical tool to generate, characterize and simulate networks with a broad range of properties. Remarkably, the study of topologically embedded graphs is non-restrictive…

Other Condensed Matter · Physics 2015-03-19 Tomaso Aste , Ruggero Gramatica , T. Di Matteo

We study hypergraph visualization via its topological simplification. We explore both vertex simplification and hyperedge simplification of hypergraphs using tools from topological data analysis. In particular, we transform a hypergraph to…

Human-Computer Interaction · Computer Science 2021-04-23 Youjia Zhou , Archit Rathore , Emilie Purvine , Bei Wang

Controlling a complex network is of great importance in many applications. The network can be controlled by inputting external control signals through some selected nodes, which are called input nodes. Previous works found that the majority…

Social and Information Networks · Computer Science 2019-10-23 Xizhe Zhang , Qian Li

Clustering is a well-known and important problem with numerous applications. The graph-based model is one of the typical cluster models. In the graph model, clusters are generally defined as cliques. However, such an approach might be too…

Data Structures and Algorithms · Computer Science 2017-06-30 Ivan Bliznets , Nikolai Karpov

We describe a synchronous distributed algorithm which identifies the edge-biconnected components of a connected network. It requires a leader, and uses messages of size O(log |V|). The main idea is to preorder a BFS spanning tree, and then…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 David Pritchard

Graph-based collaborative filtering (CF) algorithms have gained increasing attention. Existing work in this literature usually models the user-item interactions as a bipartite graph, where users and items are two isolated node sets and…

Information Retrieval · Computer Science 2020-11-19 Zekun Li , Yujia Zheng , Shu Wu , Xiaoyu Zhang , Liang Wang

Bipartite graphs are a prevalent modeling tool for real-world networks, capturing interactions between vertices of two different types. Within this framework, bicliques emerge as crucial structures when studying dense subgraphs: they are…

Data Structures and Algorithms · Computer Science 2024-05-27 Alexis Baudin , Clémence Magnien , Lionel Tabourier

The problem of identifying the maximum edge biclique in bipartite graphs has attracted considerable attention in bipartite graph analysis, with numerous real-world applications such as fraud detection, community detection, and online…

Data Structures and Algorithms · Computer Science 2025-06-23 Donghang Cui , Ronghua Li , Qiangqiang Dai , Hongchao Qin , Guoren Wang

We propose a new approach to text semantic analysis and general corpus analysis using, as termed in this article, a "bi-gram graph" representation of a corpus. The different attributes derived from graph theory are measured and analyzed as…

Machine Learning · Computer Science 2021-07-30 Thomas Konstantinovsky , Matan Mizrachi

Recommender systems often rely on graph-based filters, such as normalized item-item adjacency matrices and low-pass filters. While effective, the centralized computation of these components raises concerns about privacy, security, and the…

Information Retrieval · Computer Science 2025-01-29 Julien Nicolas , César Sabater , Mohamed Maouche , Sonia Ben Mokhtar , Mark Coates