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We investigate the possibility of extending the notion of temperature in a stochastic model for the RNA/protein folding driven out of equilibrium. We simulate the dynamics of a small RNA hairpin subject to an external pulling force, which…

Statistical Mechanics · Physics 2021-08-02 Marco Ancona , Alessandro Bentivoglio , Michele Caraglio , Giuseppe Gonnella , Alessandro Pelizzola

The thermal conductivity of nanoparticles colloidal suspensions, submitted to the action of an external force field has been calculated by non equilibrium molecular dynamics simulations. For driven forces in the radio frequency and…

Mesoscale and Nanoscale Physics · Physics 2008-01-25 Clément Le Goff , Philippe Ben-Abdallah , Gilberto Domingues , Ahmed Ould El Moctar

Almost a century ago, Johnson and Nyquist presented evidence of fluctuating electrical current and the governing fluctuation dissipation theorem (FDT). Whether, likewise, temperature T can fluctuate is a controversial topic and has led to…

Mesoscale and Nanoscale Physics · Physics 2019-04-11 Bayan Karimi , Fredrik Brange , Peter Samuelsson , Jukka P. Pekola

We introduce a thermodynamically consistent, minimal stochastic model for complementary logic gates built with field-effect transistors. We characterize the performance of such gates with tools from information theory and study the…

Statistical Mechanics · Physics 2021-08-25 Chloe Ya Gao , David T. Limmer

A nanoscale-sized Stirling engine with an atomistic working fluid has been modeled using molecular dynamics simulation. The design includes heat exchangers based on thermostats, pistons attached to a flywheel under load, and a regenerator.…

Computational Physics · Physics 2009-05-03 D. C. Rapaport

A non-reciprocal phonon model for microwave or optical isolators is considered. It gives a simpler framework to further investigate the formerly argued possibility for a heat transfer between black bodies at common temperatures. While the…

Statistical Mechanics · Physics 2007-05-23 Alejandro Cabo Montes de Oca

It is known that temperature estimates of macroscopic systems in equilibrium are most precise when their energy fluctuations are large. However, for nanoscale systems deviations from standard thermodynamics arise due to their interactions…

Quantum Physics · Physics 2018-06-14 Harry J. D. Miller , Janet Anders

Frictional properties of interfaces with dynamic chemical bonds have been the subject of intensive experimental investigation and modeling, as it provides important insights into the molecular origin of the empirical rate and state laws,…

Mesoscale and Nanoscale Physics · Physics 2020-01-24 Wengen Ouyang , Yao Cheng , Ming Ma , Michael Urbakh

We investigate the microscopic mechanism of quantum energy transfer in the nonequilibrium spin-boson model. By developing a nonequilibrium polaron-transformed Redfield equation based on fluctuation decoupling, we dissect the energy transfer…

Mesoscale and Nanoscale Physics · Physics 2015-08-11 Chen Wang , Jie Ren , Jianshu Cao

Small thermodynamic systems exhibit peculiar behavior different from that observed in long-scale systems. Non-equilibrium processes taking place in those systems are strongly influenced by the presence of fluctuations which can be large.…

Statistical Mechanics · Physics 2007-05-23 J. M. Rubi

Non-equilibrium quantum thermodynamics is an intensively developing field with many existing applications. We study the dynamics of temperatures and chemical potentials of fermionic reservoirs coupled to an open quantum system. We show that…

Quantum Physics · Physics 2024-12-23 I. V. Vovchenko , A. A. Zyablovsky , A. A. Pukhov , E. S. Andrianov

Molecular dynamic (MD) simulations are applied to investigate the dependency of the kinetic friction coefficient on the temperature at the nano-scale. The system is comprised of an aluminum spherical particle consisting of 32000 atoms in an…

Data Analysis, Statistics and Probability · Physics 2023-11-08 Rasoul Kheiri , Alexey A Tsukanov

We consider a stochastic heat conduction model for solids composed by N interacting atoms. The system is in contact with two heat baths at different temperature $T_\ell$ and $T_r$. The bulk dynamics conserve two quantities: the energy and…

Statistical Mechanics · Physics 2009-11-13 Cedric Bernardin

We address the question of transport of heat, in out-of-equilibrium systems. The experimental set-up consists in two coupled granular gas Non-Equilibrium Steady State (NESS) heat baths, in which Brownian-like rotors are imbedded. These…

Statistical Mechanics · Physics 2021-05-05 Mona Lamèche , Antoine Naert

We investigate a mechanism for extracting heat from metallic conductors based on the energy-selective transmission of electrons through a spatially asymmetric resonant structure subject to ac driving. This quantum refrigerator can operate…

Mesoscale and Nanoscale Physics · Physics 2007-09-06 Miguel Rey , Michael Strass , Sigmund Kohler , Peter Hänggi , Fernando Sols

Dissipative particle dynamics (DPD) does not conserve energy and this precludes its use in the study of thermal processes in complex fluids. We present here a generalization of DPD that incorporates an internal energy and a temperature…

Statistical Mechanics · Physics 2016-08-15 Pep Español

We extend the principles of information thermodynamics to study energy and information exchanges between coupled systems composed of one part undergoing a Markov jump process and another underdamped diffusion. We derive integral fluctuation…

Statistical Mechanics · Physics 2024-12-05 Ashwin Gopal , Nahuel Freitas , Massimiliano Esposito

The heating of particles by plasma radiation plays a critical role in space science involving dusty plasma as well as in industrial processes such as plasma vapor deposition, microchip production, etching and plasma fusion. Numerical…

Plasma Physics · Physics 2025-09-09 A. Povitsky , M. N. Shneider

We examine stochastic processes that are used to model nonequilibrium processes (e.g, pulling RNA or dragging colloids) and so deliberately violate detailed balance. We argue that by combining an information-theoretic measure of…

Statistical Mechanics · Physics 2009-11-13 R. A. Blythe

Using the Landauer-Buttiker theory we calculate the thermal conductance associated to plasmons modes in one dimensional arrays of nanoparticles closely spaced in a host fluid. Our numerical simulations show that the near-field interactions…

Mesoscale and Nanoscale Physics · Physics 2008-01-25 Philippe Ben-Abdallah
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