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Related papers: Nested Named Entity Recognition from Medical Texts…

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The clinical named entity recognition (CNER) task seeks to locate and classify clinical terminologies into predefined categories, such as diagnostic procedure, disease disorder, severity, medication, medication dosage, and sign symptom.…

Computation and Language · Computer Science 2021-06-25 Yichao Zhou , Chelsea Ju , J. Harry Caufield , Kevin Shih , Calvin Chen , Yizhou Sun , Kai-Wei Chang , Peipei Ping , Wei Wang

Named entity recognition is a fundamental task in natural language processing, identifying the span and category of entities in unstructured texts. The traditional sequence labeling methodology ignores the nested entities, i.e. entities…

Computation and Language · Computer Science 2022-10-24 Xueru Wen , Changjiang Zhou , Haotian Tang , Luguang Liang , Yu Jiang , Hong Qi

Biomedical Named Entity Recognition presents significant challenges due to the complexity of biomedical terminology and inconsistencies in annotation across datasets. This paper introduces SRU-NER (Slot-based Recurrent Unit NER), a novel…

Computation and Language · Computer Science 2025-07-25 João Ruano , Gonçalo M. Correia , Leonor Barreiros , Afonso Mendes

We cast nested named entity recognition (NNER) as a sequence labeling task by leveraging prior work that linearizes constituency structures, effectively reducing the complexity of this structured prediction problem to straightforward token…

Computation and Language · Computer Science 2025-09-30 Alberto Muñoz-Ortiz , David Vilares , Caio Corro , Carlos Gómez-Rodríguez

Nested entities are observed in many domains due to their compositionality, which cannot be easily recognized by the widely-used sequence labeling framework. A natural solution is to treat the task as a span classification problem. To learn…

Computation and Language · Computer Science 2022-04-05 Zheng Yuan , Chuanqi Tan , Songfang Huang , Fei Huang

Named entity recognition (NER) is one of the best studied tasks in natural language processing. However, most approaches are not capable of handling nested structures which are common in many applications. In this paper we introduce a novel…

Computation and Language · Computer Science 2019-08-12 Joseph Fisher , Andreas Vlachos

Named Entity Recognition (NER) is a fundamental task in Natural Language Processing, concerned with identifying spans of text expressing references to entities. NER research is often focused on flat entities only (flat NER), ignoring the…

Computation and Language · Computer Science 2020-06-16 Juntao Yu , Bernd Bohnet , Massimo Poesio

Neural architecture for named entity recognition has achieved great success in the field of natural language processing. Currently, the dominating architecture consists of a bi-directional recurrent neural network (RNN) as the encoder and a…

Computation and Language · Computer Science 2018-10-01 Shuyang Cao , Xipeng Qiu , Xuanjing Huang

Named entity recognition (NER) is an important research problem in natural language processing. There are three types of NER tasks, including flat, nested and discontinuous entity recognition. Most previous sequential labeling models are…

Computation and Language · Computer Science 2023-03-21 Ying Mo , Hongyin Tang , Jiahao Liu , Qifan Wang , Zenglin Xu , Jingang Wang , Wei Wu , Zhoujun Li

Attention mechanisms have become integral in AI, significantly enhancing model performance and scalability by drawing inspiration from human cognition. Concurrently, the Attention Schema Theory (AST) in cognitive science posits that…

Artificial Intelligence · Computer Science 2025-09-22 Krati Saxena , Federico Jurado Ruiz , Guido Manzi , Dianbo Liu , Alex Lamb

We propose two neural network architectures for nested named entity recognition (NER), a setting in which named entities may overlap and also be labeled with more than one label. We encode the nested labels using a linearized scheme. In our…

Computation and Language · Computer Science 2019-08-20 Jana Straková , Milan Straka , Jan Hajič

Named Entity Recognition (NER) aims at locating and classifying named entities in text. In some use cases of NER, including cases where detected named entities are used in creating content recommendations, it is crucial to have a reliable…

Neural and Evolutionary Computing · Computer Science 2017-12-07 Mahdi Namazifar

Nested named entity recognition (NER) has been receiving increasing attention. Recently, (Fu et al, 2021) adapt a span-based constituency parser to tackle nested NER. They treat nested entities as partially-observed constituency trees and…

Computation and Language · Computer Science 2022-03-10 Chao Lou , Songlin Yang , Kewei Tu

Recent approaches based on artificial neural networks (ANNs) have shown promising results for named-entity recognition (NER). In order to achieve high performances, ANNs need to be trained on a large labeled dataset. However, labels might…

Computation and Language · Computer Science 2017-05-18 Ji Young Lee , Franck Dernoncourt , Peter Szolovits

Sequential labeling-based NER approaches restrict each word belonging to at most one entity mention, which will face a serious problem when recognizing nested entity mentions. In this paper, we propose to resolve this problem by modeling…

Computation and Language · Computer Science 2019-06-11 Hongyu Lin , Yaojie Lu , Xianpei Han , Le Sun

Deciding what and when to observe is critical when making observations is costly. In a medical setting where observations can be made sequentially, making these observations (or not) should be an active choice. We refer to this as the…

Machine Learning · Computer Science 2019-06-18 Jinsung Yoon , James Jordon , Mihaela van der Schaar

Named entity recognition (NER) systems that perform well require task-related and manually annotated datasets. However, they are expensive to develop, and are thus limited in size. As there already exists a large number of NER datasets that…

Computation and Language · Computer Science 2019-04-23 Nargiza Nosirova , Mingbin Xu , Hui Jiang

Named Entity Recognition (NER) is an important task in natural language processing that aims to identify and extract key entities from unstructured text. We present a novel application of NER in plasma physics research articles and address…

Computation and Language · Computer Science 2026-02-13 Muhammad Haris , Hans Höft , Markus M. Becker , Markus Stocker

Named entity recognition (NER) is a well-studied task in natural language processing. However, the widely-used sequence labeling framework is difficult to detect entities with nested structures. In this work, we view nested NER as…

Computation and Language · Computer Science 2020-12-16 Yao Fu , Chuanqi Tan , Mosha Chen , Songfang Huang , Fei Huang

Semantic segmentation is a fundamental task in computer vision that involves dense pixel-wise classification for scene understanding. Despite significant progress, achieving high accuracy while maintaining real-time performance remains a…

Computer Vision and Pattern Recognition · Computer Science 2025-07-08 Abhinav Sagar