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Medical image analysis plays a key role in precision medicine as it allows the clinicians to identify anatomical abnormalities and it is routinely used in clinical assessment. Data curation and pre-processing of medical images are critical…

Image and Video Processing · Electrical Eng. & Systems 2024-07-19 Sergey Primakov , Elizaveta Lavrova , Zohaib Salahuddin , Henry C Woodruff , Philippe Lambin

High dimensional sampling is an important computational tool in statistics and other computational disciplines, with applications ranging from Bayesian statistical uncertainty quantification, metabolic modeling in systems biology to volume…

Computation · Statistics 2024-12-10 Benny Sun , Yuansi Chen

One may construct a large class of Calabi-Yau varieties by taking anticanonical hypersurfaces in toric varieties obtained from reflexive polytopes. If the intersection of a reflexive polytope with a hyperplane through the origin yields a…

polyDB is a database for discrete geometric objects. The database is accessible via web and an interface from the software package polymake. It contains various datasets from the area of lattice polytopes, combinatorial polytopes, matroids…

Combinatorics · Mathematics 2017-11-09 Andreas Paffenholz

We give a method for the computation of the plurigenera of a product-quotient manifold. We give two different types of applications to it: to the construction of Calabi-Yau threefolds and to the determination of the minimal model of a…

Algebraic Geometry · Mathematics 2019-10-04 Filippo F. Favale , Christian Gleissner , Roberto Pignatelli

A construction of Calabi-Yaus as quotients of products of lower-dimensional spaces in the context of weighted hypersurfaces is discussed, including desingularisation. The construction leads to Calabi-Yaus which have a fiber structure, in…

Algebraic Geometry · Mathematics 2023-09-12 Bruce Hunt , Rolf Schimmrigk

We design and implement a Python library to help the non-expert using all these powerful tools in a way that is efficient, extensible, and simple to incorporate into the workflow of the data scientist, practitioner, and applied researcher.…

Optimization and Control · Mathematics 2022-04-13 Mario Lezcano-Casado

In this paper we discuss two different existing algorithms for computing topological entropy and we perform one of them in order to compute the isentropes for cubic polynomials.

Dynamical Systems · Mathematics 2020-06-25 Noah Cockram , Ana Rodrigues

We develop methods to compute holomorphic Yukawa couplings for heterotic compactifications on complete intersection Calabi-Yau manifolds, generalising results of an earlier paper for Calabi-Yau hypersurfaces. Our methods are based on…

High Energy Physics - Theory · Physics 2017-03-08 Stefan Blesneag , Evgeny I. Buchbinder , Andre Lukas

We study the B-model chiral ring of Calabi-Yau hypersurfaces in Batyrev's mirror construction. The main result is an explicit description of a subring of the chiral ring of semiample regular (transversal to torus orbits) Calabi-Yau…

Algebraic Geometry · Mathematics 2007-05-23 Anvar R. Mavlyutov

We study heterotic model building on 16 specific Calabi-Yau manifolds constructed as hypersurfaces in toric four-folds. These 16 manifolds are the only ones among the more than half a billion manifolds in the Kreuzer-Skarke list with a…

High Energy Physics - Theory · Physics 2015-06-17 Yang-Hui He , Seung-Joo Lee , Andre Lukas , Chuang Sun

We briefly review an algorithmic strategy to explore the landscape of heterotic E8 \times E8 vacua, in the context of compactifying smooth Calabi-Yau three-folds with vector bundles. The Calabi-Yau three-folds are algebraically realised as…

High Energy Physics - Theory · Physics 2011-05-18 Seung-Joo Lee

We describe the computer algebra software package SpectralSequences for the computer algebra system Macaulay2. This package implements many data types, objects and algorithms which pertain to, among other things, filtered complexes,…

Commutative Algebra · Mathematics 2016-10-19 Adam Boocher , Nathan Grieve , Eloísa Grifo

We develop numerical methods for approximating Ricci flat metrics on Calabi-Yau hypersurfaces in projective spaces. Our approach is based on finding balanced metrics, and builds on recent theoretical work by Donaldson. We illustrate our…

High Energy Physics - Theory · Physics 2008-11-26 Michael R. Douglas , Robert L. Karp , Sergio Lukic , Rene Reinbacher

This article introduces CluBear, a Python-based open-source package for interactive massive data analysis. The key feature of CluBear is that it enables users to conduct convenient and interactive statistical analysis of massive data with…

Methodology · Statistics 2023-12-29 Ke Xu , Yingqiu Zhu , Yijing Liu , Hansheng Wang

Most of Calabi-Yau manifolds that have been considered by physicists are complete intersection Calabi-Yau manifolds of toric varieties or some quotients of product types. Purpose of this paper is to introduce a different and rather new kind…

High Energy Physics - Theory · Physics 2014-11-20 Nam-Hoon Lee

Optimization over the embedded submanifold defined by constraints $c(x) = 0$ has attracted much interest over the past few decades due to its wide applications in various areas. Plenty of related optimization packages have been developed…

Optimization and Control · Mathematics 2024-10-15 Nachuan Xiao , Xiaoyin Hu , Xin Liu , Kim-Chuan Toh

We propose a geometric characterisation of the topological string partition functions associated to the local Calabi-Yau (CY) manifolds used in the geometric engineering of $d=4$, $\mathcal{N}=2$ supersymmetric field theories of class…

High Energy Physics - Theory · Physics 2024-02-15 Ioana Coman , Pietro Longhi , Jörg Teschner

We present a Python toolbox for holographic and tomographic X-ray imaging. It comprises a collection of phase retrieval algorithms for the deeply holographic and direct contrast imaging regimes, including non-linear approaches and extended…

Optics · Physics 2025-11-03 Jens Lucht , Paul Meyer , Leon Merten Lohse , Tim Salditt

A Python package for post-processing of plane two-dimensional data from computational fluid dynamics simulations is presented. The package, called turbulucid, provides means for scripted, reproducible analysis of large simulation campaigns…

Computational Engineering, Finance, and Science · Computer Science 2018-07-26 Timofey Mukha