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Implicit neural representation is a recent approach to learn shape collections as zero level-sets of neural networks, where each shape is represented by a latent code. So far, the focus has been shape reconstruction, while shape…

Computer Vision and Pattern Recognition · Computer Science 2021-08-23 Matan Atzmon , David Novotny , Andrea Vedaldi , Yaron Lipman

Purpose. Given the high level of expertise required for navigation and interpretation of ultrasound images, computational simulations can facilitate the training of such skills in virtual reality. With ray-tracing based simulations,…

Image and Video Processing · Electrical Eng. & Systems 2021-01-22 Lin Zhang , Tiziano Portenier , Orcun Goksel

Joint registration of a stack of 2D histological sections to recover 3D structure (``3D histology reconstruction'') finds application in areas such as atlas building and validation of \emph{in vivo} imaging. Straightforward pairwise…

Image and Video Processing · Electrical Eng. & Systems 2021-12-02 Adrià Casamitjana , Marco Lorenzi , Sebastiano Ferraris , Loc Peter , Marc Modat , Allison Stevens , Bruce Fischl , Tom Vercauteren , Juan Eugenio Iglesias

Robotic grasping of house-hold objects has made remarkable progress in recent years. Yet, human grasps are still difficult to synthesize realistically. There are several key reasons: (1) the human hand has many degrees of freedom (more than…

Computer Vision and Pattern Recognition · Computer Science 2020-11-30 Korrawe Karunratanakul , Jinlong Yang , Yan Zhang , Michael Black , Krikamol Muandet , Siyu Tang

3D head avatars built with neural implicit volumetric representations have achieved unprecedented levels of photorealism. However, the computational cost of these methods remains a significant barrier to their widespread adoption,…

Computer Vision and Pattern Recognition · Computer Science 2024-04-03 Ziqian Bai , Feitong Tan , Sean Fanello , Rohit Pandey , Mingsong Dou , Shichen Liu , Ping Tan , Yinda Zhang

We study the design of transfer functions for volumetric rendering of magnetic resonance imaging (MRI) datasets of human hands. Human hands are anatomically complex, containing various organs within a limited space, which presents…

Graphics · Computer Science 2024-12-02 Jingtao Huang , Bohan Wang , Zhiyuan Gao , Mianlun Zheng , George Matcuk , Jernej Barbic

We propose a novel point cloud based 3D organ segmentation pipeline utilizing deep Q-learning. In order to preserve shape properties, the learning process is guided using a statistical shape model. The trained agent directly predicts…

Computer Vision and Pattern Recognition · Computer Science 2018-06-18 Xia Zhong , Mario Amrehn , Nishant Ravikumar , Shuqing Chen , Norbert Strobel , Annette Birkhold , Markus Kowarschik , Rebecca Fahrig , Andreas Maier

We present an efficient neural network method for locating anatomical landmarks in 3D medical CT scans, using atlas location autocontext in order to learn long-range spatial context. Location predictions are made by regression to Gaussian…

Computer Vision and Pattern Recognition · Computer Science 2018-10-02 Alison Q O'Neil , Antanas Kascenas , Joseph Henry , Daniel Wyeth , Matthew Shepherd , Erin Beveridge , Lauren Clunie , Carrie Sansom , Evelina Šeduikytė , Keith Muir , Ian Poole

Computed Tomography (CT) using synchrotron radiation is a powerful technique that, compared to lab-CT techniques, boosts high spatial and temporal resolution while also providing access to a range of contrast-formation mechanisms. The…

Image and Video Processing · Electrical Eng. & Systems 2025-01-20 Jiayang Shi , Daniel M. Pelt , K. Joost Batenburg

In clinical radiology reports, doctors capture important information about the patient's health status. They convey their observations from raw medical imaging data about the inner structures of a patient. As such, formulating reports…

Computer Vision and Pattern Recognition · Computer Science 2022-10-10 Constantin Seibold , Simon Reiß , Saquib Sarfraz , Matthias A. Fink , Victoria Mayer , Jan Sellner , Moon Sung Kim , Klaus H. Maier-Hein , Jens Kleesiek , Rainer Stiefelhagen

This work is concerned with a representation of shapes that disentangles fine, local and possibly repeating geometry, from global, coarse structures. Achieving such disentanglement leads to two unrelated advantages: i) a significant…

Computer Vision and Pattern Recognition · Computer Science 2022-04-06 Luca Morreale , Noam Aigerman , Paul Guerrero , Vladimir G. Kim , Niloy J. Mitra

We introduce the largest abdominal CT dataset (termed AbdomenAtlas) of 20,460 three-dimensional CT volumes sourced from 112 hospitals across diverse populations, geographies, and facilities. AbdomenAtlas provides 673K high-quality masks of…

Modeling a 3D volumetric shape as an assembly of decomposed shape parts is much more challenging, but semantically more valuable than direct reconstruction from a full shape representation. The neural network needs to implicitly learn part…

Computer Vision and Pattern Recognition · Computer Science 2023-04-24 Chengzhi Wu , Junwei Zheng , Julius Pfrommer , Jürgen Beyerer

A neural implicit outputs a number indicating whether the given query point in space is inside, outside, or on a surface. Many prior works have focused on _latent-encoded_ neural implicits, where a latent vector encoding of a specific shape…

Graphics · Computer Science 2021-01-19 Thomas Davies , Derek Nowrouzezahrai , Alec Jacobson

We present a novel method for quantifying the microscopic structure of brain tissue. It is based on the automated recognition of interpretable features obtained by analyzing the shapes of cells. This contrasts with prevailing methods of…

Computer Vision and Pattern Recognition · Computer Science 2024-04-10 Kui Qian , Litao Qiao , Beth Friedman , Edward O'Donnell , David Kleinfeld , Yoav Freund

Recently introduced implicit field representations offer an effective way of generating 3D object shapes. They leverage implicit decoder trained to take a 3D point coordinate concatenated with a shape encoding and to output a value which…

Computer Vision and Pattern Recognition · Computer Science 2021-10-13 Magdalena Proszewska , Marcin Mazur , Tomasz Trzciński , Przemysław Spurek

Spatio-temporal fetal brain atlases are important for characterizing normative neurodevelopment and identifying congenital anomalies. However, existing atlas construction pipelines necessitate days for slice-to-volume reconstruction (SVR)…

Computer Vision and Pattern Recognition · Computer Science 2026-05-12 Xiaotian Hu , Mingxuan Liu , Hongjia Yang , Juncheng Zhu , Yijin Li , Yifei Chen , Haoxiang Li , Tongxi Song , Zihan Li , Yingqi Hao , Ziyu Li , Yujin Zhang , Gang Ning , Yi Liao , Haibo Qu , Qiyuan Tian

We propose an atlas-based method to segment the intracochlear anatomy (ICA) in the post-implantation CT (Post-CT) images of cochlear implant (CI) recipients that preserves the point-to-point correspondence between the meshes in the atlas…

Image and Video Processing · Electrical Eng. & Systems 2021-07-12 Jianing Wang , Dingjie Su , Yubo Fan , Srijata Chakravorti , Jack H. Noble , Benoit M. Dawant

We address the problem of unsupervised learning of complex articulated object models from 3D range data. We describe an algorithm whose input is a set of meshes corresponding to different configurations of an articulated object. The…

Computer Vision and Pattern Recognition · Computer Science 2012-07-19 Dragomir Anguelov , Daphne Koller , Hoi-Cheung Pang , Praveen Srinivasan , Sebastian Thrun

Object functionality is often expressed through part articulation -- as when the two rigid parts of a scissor pivot against each other to perform the cutting function. Such articulations are often similar across objects within the same…

Computer Vision and Pattern Recognition · Computer Science 2018-09-21 Li Yi , Haibin Huang , Difan Liu , Evangelos Kalogerakis , Hao Su , Leonidas Guibas