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Pairwise compatibility graphs (PCGs) with non-negative integer edge weights recently have been used to describe rare evolutionary events and scenarios with horizontal gene transfer. Here we consider the case that vertices are separated by…

Combinatorics · Mathematics 2020-05-26 Yangjing Long , Peter F. Stadler

Let $\Phi(x,y)\in\mathbb{C}[x,y]$ be a symmetric polynomial of partial degree $d$. The graph $G(\Phi)$ is defined by taking $\mathbb{C}$ as set of vertices and the points of $\mathbb{V}(\Phi(x,y))$ as edges. We study the following problem:…

Commutative Algebra · Mathematics 2007-05-23 Josep M. Brunat , Antonio Montes

We show that large subsets of vector spaces over finite fields determine certain point configurations with prescribed distance structure. More specifically, we consider the complete graph with vertices as the points of $A \subseteq…

Combinatorics · Mathematics 2018-02-20 Alex Iosevich , Hans Parshall

We define, for any graph $G=(V,E)$, a boundary $\partial G \subseteq V$. The definition coincides with what one would expected for the discretization of (sufficiently nice) Euclidean domains and contains all vertices from the…

Combinatorics · Mathematics 2022-01-11 Stefan Steinerberger

We show that the following two problems are fixed-parameter tractable with parameter k: testing whether a connected n-vertex graph with m edges has a square root with at most n-1+k edges and testing whether such a graph has a square root…

Data Structures and Algorithms · Computer Science 2013-10-22 Manfred Cochefert , Jean-François Couturier , Petr A. Golovach , Dieter Kratsch , Daniël Paulusma

The emergence of geometric deep learning as a novel framework to deal with graph-based representations has faded away traditional approaches in favor of completely new methodologies. In this paper, we propose a new framework able to combine…

Computer Vision and Pattern Recognition · Computer Science 2020-08-19 Pau Riba , Andreas Fischer , Josep Lladós , Alicia Fornés

Graphlets are subgraphs rooted at a fixed vertex. The number of occurrences of graphlets aligned to a particular vertex, called graphlet degree sequence (gds), gives a topological description of the surrounding of the analyzed vertex.…

Combinatorics · Mathematics 2026-01-01 David Hartman , Aneta Pokorná , Daniel Trlifaj , Lluís Vena

For a hereditary graph class $\mathcal{H}$, the $\mathcal{H}$-elimination distance of a graph $G$ is the minimum number of rounds needed to reduce $G$ to a member of $\mathcal{H}$ by removing one vertex from each connected component in each…

Data Structures and Algorithms · Computer Science 2021-06-09 Bart M. P. Jansen , Jari J. H. de Kroon

A geometric graph is a graph drawn in the plane so that its vertices and edges are represented by points in general position and straight line segments, respectively. A vertex of a geometric graph is called pointed if it lies outside of the…

Combinatorics · Mathematics 2022-08-31 Nikita Chernega , Alexandr Polyanskii , Rinat Sadykov

Graph similarity computation is one of the core operations in many graph-based applications, such as graph similarity search, graph database analysis, graph clustering, etc. Since computing the exact distance/similarity between two graphs…

Machine Learning · Computer Science 2021-05-18 Yunsheng Bai , Hao Ding , Yizhou Sun , Wei Wang

The treewidth of a graph is an important invariant in structural and algorithmic graph theory. This paper studies the treewidth of line graphs. We show that determining the treewidth of the line graph of a graph $G$ is equivalent to…

Combinatorics · Mathematics 2014-09-25 Daniel J. Harvey , David R. Wood

The eccentricity matrix $\epsilon(G)$, of a connected graph $G$ is obtained by retaining the maximum distance from each row and column of the distance matrix of $G$ and the other entries are assigned with 0. In this paper, we discuss the…

Combinatorics · Mathematics 2024-05-01 Anjitha Ashokan , Chithra A

A split graph is a graph whose vertex set can be partitioned into a clique and a stable set. Given a graph $G$ and weight function $w: V(G) \to \mathbb{Q}_{\geq 0}$, the Split Vertex Deletion (SVD) problem asks to find a minimum weight set…

Combinatorics · Mathematics 2020-09-24 Matthew Drescher , Samuel Fiorini , Tony Huynh

We initiate the study of a fundamental combinatorial problem: Given a capacitated graph $G=(V,E)$, find a shortest walk ("route") from a source $s\in V$ to a destination $t\in V$ that includes all vertices specified by a set…

Data Structures and Algorithms · Computer Science 2018-05-01 Saeed Akhoondian Amiri , Klaus-Tycho Foerster , Stefan Schmid

Grid graphs, and, more generally, $k\times r$ grid graphs, form one of the most basic classes of geometric graphs. Over the past few decades, a large body of works studied the (in)tractability of various computational problems on grid…

Data Structures and Algorithms · Computer Science 2021-07-01 Siddharth Gupta , Guy Sa'ar , Meirav Zehavi

Graph orientation is a well-studied area of graph theory. A proper orientation of a graph $G = (V,E)$ is an orientation $D$ of $E(G)$ such that for every two adjacent vertices $ v $ and $ u $, $ d^{-}_{D}(v) \neq d^{-}_{D}(u)$ where…

Computational Complexity · Computer Science 2014-06-09 Arash Ahadi , Ali Dehghan

Consider the setting of \emph{randomly weighted graphs}, namely, graphs whose edge weights are chosen independently according to probability distributions with finite support over the non-negative reals. Under this setting, properties of…

Data Structures and Algorithms · Computer Science 2010-03-30 Yuval Emek , Amos Korman , Yuval Shavitt

We study the exact square chromatic number of subcubic planar graphs. An exact square coloring of a graph G is a vertex-coloring in which any two vertices at distance exactly 2 receive distinct colors. The smallest number of colors used in…

Discrete Mathematics · Computer Science 2021-02-02 Florent Foucaud , Hervé Hocquard , Suchismita Mishra , Narayanan Narayanan , Reza Naserasr , Éric Sopena , Petru Valicov

The famous Erd\H{o}s distinct distances problem asks the following: how many distinct distances must exist between a set of $n$ points in the plane? There are many generalisations of this question that ask one to consider different spaces…

Combinatorics · Mathematics 2025-05-13 Sean Dewar , Nora Frankl , Samuel Mansfield , Anthony Nixon , Jonathan Passant , Audie Warren

A graph $G$ is a prime distance graph (respectively, a 2-odd graph) if its vertices can be labeled with distinct integers such that for any two adjacent vertices, the difference of their labels is prime (either 2 or odd). We prove that…

Combinatorics · Mathematics 2021-06-07 Joshua D. Laison , Colin Starr , Andrea Walker