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We present Darts, a Python machine learning library for time series, with a focus on forecasting. Darts offers a variety of models, from classics such as ARIMA to state-of-the-art deep neural networks. The emphasis of the library is on…

We introduce Diddy, a collection of Python scripts for analyzing infinite discrete dynamical systems. The main focus is on generalized multidimensional shifts of finite type (SFTs). We show how Diddy can be used to easily define SFTs and…

Mathematical Software · Computer Science 2023-05-03 Ville Salo , Ilkka Törmä

Statistical machine learning methods are increasingly used for neuroimaging data analysis. Their main virtue is their ability to model high-dimensional datasets, e.g. multivariate analysis of activation images or resting-state time series.…

Summary Brain Predictability toolbox (BPt) represents a unified framework of machine learning (ML) tools designed to work with both tabulated data (in particular brain, psychiatric, behavioral, and physiological variables) and neuroimaging…

Machine Learning · Computer Science 2020-11-04 Sage Hahn , Dekang Yuan , Wesley Thompson , Max M Owens , Nicholas Allgaier , Hugh Garavan

With the advent of the Large Array Telescope (LAT) on board the Fermi satellite, a new window on the Universe has been opened. Publicly available, the Fermi-LAT data come together with an analysis software named ScienceTools (ST,…

Instrumentation and Methods for Astrophysics · Physics 2013-07-19 D. A. Sanchez , C. Deil

I describe our team's development of the SpeX Prism Library Analysis Toolkit (SPLAT), a combined spectral data repository for over 2500 low-resolution spectra of very low mass dwarfs (late M, L and T dwarfs), and Python-based analysis…

Solar and Stellar Astrophysics · Physics 2017-10-03 Adam J. Burgasser , the SPLAT Development Team

Software that processes real-world data or that models a physical system must have some way of managing units. While simple approaches like the understood convention that all data are in a unit system (such as the MKS SI unit system) do…

Instrumentation and Methods for Astrophysics · Physics 2018-10-03 Nathan J. Goldbaum , John A. ZuHone , Matthew J. Turk , Kacper Kowalik , Anna L. Rosen

The classification problem's complexity assessment is an essential element of many topics in the supervised learning domain. It plays a significant role in meta-learning -- becoming the basis for determining meta-attributes or…

Machine Learning · Computer Science 2022-07-15 Joanna Komorniczak , Pawel Ksieniewicz

We present the first public release (v0.1) of the open-source GADGET Dataframe Library: gadfly. The aim of this package is to leverage the capabilities of the broader python scientific computing ecosystem by providing tools for analyzing…

Instrumentation and Methods for Astrophysics · Physics 2016-10-19 Jacob Hummel

PySEMTools is a Python-based library for post-processing simulation data produced with high-order hexahedral elements in the context of the spectral element method in computational fluid dynamics. It aims to minimize intermediate steps…

Computational Physics · Physics 2025-04-18 Adalberto Perez , Siavash Toosi , Tim Felle Olsen , Stefano Markidis , Philipp Schlatter

We introduce Stanza, an open-source Python natural language processing toolkit supporting 66 human languages. Compared to existing widely used toolkits, Stanza features a language-agnostic fully neural pipeline for text analysis, including…

Computation and Language · Computer Science 2020-04-24 Peng Qi , Yuhao Zhang , Yuhui Zhang , Jason Bolton , Christopher D. Manning

This paper presents `chipfiring`, a comprehensive Python package for the mathematical analysis of chip-firing games on finite graphs. The package provides a robust toolkit for defining graphs and chip configurations (divisors), performing…

Combinatorics · Mathematics 2025-08-05 Dhyey Dharmendrakumar Mavani , Tairan Ji , Nathan Pflueger

The increasing availability of high-quality optical and near-infrared spectroscopic data, as well as advances in modelling techniques, have greatly expanded the scientific potential of spectroscopic studies. However, the software tools…

Instrumentation and Methods for Astrophysics · Physics 2025-12-23 Daniele Gasparri , Lorenzo Morelli , Umberto Battino , Jairo Méndez Abreu , Adriana de Lorenzo-Cáceres

This paper introduces scikit-hubness, a Python package for efficient nearest neighbor search in high-dimensional spaces. Hubness is an aspect of the curse of dimensionality, and is known to impair various learning tasks, including…

Machine Learning · Computer Science 2021-01-12 Roman Feldbauer , Thomas Rattei , Arthur Flexer

FCMpy is an open source package in Python for building and analyzing Fuzzy Cognitive Maps. More specifically, the package allows 1) deriving fuzzy causal weights from qualitative data, 2) simulating the system behavior, 3) applying machine…

Mathematical Software · Computer Science 2022-11-03 Samvel Mkhitaryan , Philippe J. Giabbanelli , Maciej K. Wozniak , Gonzalo Napoles , Nanne K. de Vries , Rik Crutzen

Motivation: Peptides have attracted the attention in this century due to their remarkable therapeutic properties. Computational tools are being developed to take advantage of existing information, encapsulating knowledge and making it…

The DeepMind Control Suite is a set of continuous control tasks with a standardised structure and interpretable rewards, intended to serve as performance benchmarks for reinforcement learning agents. The tasks are written in Python and…

Machine learning (ML) research and application often involve time-consuming steps such as model architecture prototyping, feature selection, and dataset preparation. To support these tasks, we introduce the Deep Fast Machine Learning Utils…

Machine Learning · Computer Science 2024-09-17 Fabi Prezja

Many real-world applications involve analyzing time-dependent phenomena, which are intrinsically functional, consisting of curves varying over a continuum (e.g., time). When analyzing continuous data, functional data analysis (FDA) provides…

Human-Computer Interaction · Computer Science 2023-06-19 Fnu Shilpika , Takanori Fujiwara , Naohisa Sakamoto , Jorji Nonaka , Kwan-Liu Ma

Raman spectroscopy is a non-destructive and label-free chemical analysis technique, which plays a key role in the analysis and discovery cycle of various branches of science. Nonetheless, progress in Raman spectroscopic analysis is still…