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Animal vocalisations and natural soundscapes are fascinating objects of study, and contain valuable evidence about animal behaviours, populations and ecosystems. They are studied in bioacoustics and ecoacoustics, with signal processing and…

Sound · Computer Science 2024-02-01 Dan Stowell

Automatic identification of plant specimens from amateur photographs could improve species range maps, thus supporting ecosystems research as well as conservation efforts. However, classifying plant specimens based on image data alone is…

Computer Vision and Pattern Recognition · Computer Science 2021-10-06 Riccardo de Lutio , Yihang She , Stefano D'Aronco , Stefania Russo , Philipp Brun , Jan D. Wegner , Konrad Schindler

Motion perception is a critical capability determining a variety of aspects of insects' life, including avoiding predators, foraging and so forth. A good number of motion detectors have been identified in the insects' visual pathways.…

Computer Vision and Pattern Recognition · Computer Science 2019-04-04 Qinbing Fu , Hongxin Wang , Cheng Hu , Shigang Yue

Automated bacterial colony counting from images is an important technique to obtain data required for the development of vaccines and antibiotics. However, bacterial colonies present unique machine vision challenges that affect counting,…

Computer Vision and Pattern Recognition · Computer Science 2026-04-23 Minghua Zheng , Na Helian , Peter C. R. Lane , Yi Sun , Allen Donald

Astrophysics and cosmology are rich with data. The advent of wide-area digital cameras on large aperture telescopes has led to ever more ambitious surveys of the sky. Data volumes of entire surveys a decade ago can now be acquired in a…

Instrumentation and Methods for Astrophysics · Physics 2017-04-18 Jan Kremer , Kristoffer Stensbo-Smidt , Fabian Gieseke , Kim Steenstrup Pedersen , Christian Igel

Ecological and conservation studies monitoring bird communities typically rely on species classification based on bird vocalizations. Historically, this has been based on expert volunteers going into the field and making lists of the bird…

Methodology · Statistics 2026-05-29 Haoxuan Wang , Patrik Lauha , David B. Dunson

Insect production for food and feed presents a promising supplement to ensure food safety and address the adverse impacts of agriculture on climate and environment in the future. However, optimisation is required for insect production to…

Computer Vision and Pattern Recognition · Computer Science 2024-06-27 Min Ren , Yunlong Wang , Yuhao Zhu , Yongzhen Huang , Zhenan Sun , Qi Li , Tieniu Tan

Microalgae, vital for ecological balance and economic sectors, present challenges in detection due to their diverse sizes and conditions. This paper summarizes the second "Vision Meets Algae" (VisAlgae 2023) Challenge, aiming to enhance…

Camera traps have long been used by wildlife researchers to monitor and study animal behavior, population dynamics, habitat use, and species diversity in a non-invasive and efficient manner. While data collection from the field has…

Computer Vision and Pattern Recognition · Computer Science 2025-07-22 Bernie Boscoe , Shawn Johnson , Andrea Osbon , Chandler Campbell , Karen Mager

Accurately counting maize tassels is important for monitoring the growth status of maize plants. This tedious task, however, is still mainly done by manual efforts. In the context of modern plant phenotyping, automating this task is…

Computer Vision and Pattern Recognition · Computer Science 2017-07-11 Hao Lu , Zhiguo Cao , Yang Xiao , Bohan Zhuang , Chunhua Shen

Computer vision (CV) is a big and important field in artificial intelligence covering a wide range of applications. Image analysis is a major task in CV aiming to extract, analyse and understand the visual content of images. However,…

Neural and Evolutionary Computing · Computer Science 2022-12-05 Ying Bi , Bing Xue , Pablo Mesejo , Stefano Cagnoni , Mengjie Zhang

The application of machine learning to bioinformatics problems is well established. Less well understood is the application of bioinformatics techniques to machine learning and, in particular, the representation of non-biological data as…

Machine Learning · Computer Science 2013-02-18 Ajit Narayanan , Yi Chen

Visual observation of Cumulus Oocyte Complexes provides only limited information about its functional competence, whereas the molecular evaluations methods are cumbersome or costly. Image analysis of mammalian oocytes can provide attractive…

Computer Vision and Pattern Recognition · Computer Science 2019-01-11 Viswanath P Sudarshan , Tobias Weiser , Phalgun Chintala , Subhamoy Mandal , Rahul Dutta

The applicability of computational models to the biological world is an active topic of debate. We argue that a useful path forward results from abandoning hard boundaries between categories and adopting an observer-dependent, pragmatic…

Multiagent Systems · Computer Science 2022-12-22 Joshua Bongard , Michael Levin

Computer vision can accelerate ecology research by automating the analysis of raw imagery from sensors like camera traps, drones, and satellites. However, computer vision is an emerging discipline that is rarely taught to ecologists. This…

Computers and Society · Computer Science 2023-01-06 Elijah Cole , Suzanne Stathatos , Björn Lütjens , Tarun Sharma , Justin Kay , Jason Parham , Benjamin Kellenberger , Sara Beery

Accurate pest population monitoring and tracking their dynamic changes are crucial for precision agriculture decision-making. A common limitation in existing vision-based automatic pest counting research is that models are typically…

Computer Vision and Pattern Recognition · Computer Science 2025-12-12 Xumin Gao , Mark Stevens , Grzegorz Cielniak

Increasingly sophisticated experiments, coupled with large-scale computational models, have the potential to systematically test biological hypotheses to drive our understanding of multicellular systems. In this short review, we explore key…

Quantitative Methods · Quantitative Biology 2019-10-28 Paul Macklin

Monitoring plankton populations in situ is fundamental to preserve the aquatic ecosystem. Plankton microorganisms are in fact susceptible of minor environmental perturbations, that can reflect into consequent morphological and dynamical…

Computer Vision and Pattern Recognition · Computer Science 2022-09-15 Paolo Didier Alfano , Marco Rando , Marco Letizia , Francesca Odone , Lorenzo Rosasco , Vito Paolo Pastore

Insects as pollinators play a crucial role in ecosystem management and world food production. However, insect populations are declining, calling for efficient methods of insect monitoring. Existing methods analyze video or time-lapse images…

Computer Vision and Pattern Recognition · Computer Science 2023-06-30 Kim Bjerge , Carsten Eie Frigaard , Henrik Karstoft

Biofouling is the accumulation of organisms on surfaces immersed in water. It is of particular concern to the international shipping industry because it increases fuel costs and presents a biosecurity risk by providing a pathway for…

Computer Vision and Pattern Recognition · Computer Science 2021-02-22 Nathaniel J. Bloomfield , Susan Wei , Bartholomew Woodham , Peter Wilkinson , Andrew Robinson