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High-throughput imaging workflows, such as Parallel Rapid Imaging with Spectroscopic Mapping (PRISM), generate data at rates that exceed conventional real-time processing capabilities. We present a scalable FPGA-based preprocessing pipeline…

Hardware Architecture · Computer Science 2025-11-26 Weichien Liao

Automated searches for strong gravitational lensing in optical imaging survey datasets often employ machine learning and deep learning approaches. These techniques require more example systems to train the algorithms than have presently…

Instrumentation and Methods for Astrophysics · Physics 2021-02-08 Robert Morgan , Brian Nord , Simon Birrer , Joshua Yao-Yu Lin , Jason Poh

The MeMC is an open-source software package for monte-carlo simulation of elastic shells. It is designed as a tool to interpret the force-distance data generated by indentation of biological nano-vesicles by atomic force microscopes. The…

Computational Physics · Physics 2022-06-28 Vipin Agrawal , Vikash Pandey , Hanna Kylhammar , Apurba Dev , Dhrubaditya Mitra

Backgr: Digital pathology images are increasingly used both for diagnosis and research, because slide scanners are nowadays broadly available and because the quantitative study of these images yields new insights in systems biology.…

Quantitative Methods · Quantitative Biology 2017-09-08 Christophe Deroulers , David Ameisen , Mathilde Badoual , Chloé Gerin , Alexandre Granier , Marc Lartaud

High-speed spatial light modulators (SLM) are crucial components for free-space communication and structured illumination imaging. Current approaches for dynamical spatial mode generation, such as liquid crystal SLMs or digital micromirror…

Optics · Physics 2023-01-18 Xialin Liu , Boris Braverman , Robert W. Boyd

We present a new adaptive resolution technique for efficient particle-based multiscale molecular dynamics (MD) simulations. The presented approach is tailor-made for molecular systems where atomistic resolution is required only in spatially…

Soft Condensed Matter · Physics 2007-05-23 Matej Praprotnik , Luigi Delle Site , Kurt Kremer

Several visualization schemes have been developed for imaging materials at the atomic level through atom probe tomography. The main shortcoming of these tools is their inability to parallel process data using multi-core computing units to…

Materials Science · Physics 2012-02-07 Hari Dahal , Michael Stukowski , Matthias J. Graf , Alexander V. Balatsky , Krishna Rajan

Spectral line observations encode a wealth of information. A key challenge, therefore, lies in the interpretation of these observations in terms of models to derive the physical and chemical properties of the astronomical environments from…

Instrumentation and Methods for Astrophysics · Physics 2024-09-06 Frederik De Ceuster , Thomas Ceulemans , Leen Decin , Taïssa Danilovich , Jeremy Yates

Fourier Ptychographic Microscopy (FPM) is a computational imaging method that is able to super-resolve features beyond the diffraction-limit set by the objective lens of a traditional microscope. This is accomplished by using synthetic…

Signal Processing · Electrical Eng. & Systems 2019-04-09 Michael Kellman , Emrah Bostan , Michael Chen , Laura Waller

ScopeSim is a flexible multipurpose instrument data simulation framework built in Python. It enables both raw and reduced observation data to be simulated for a wide range of telescopes and instruments quickly and efficiently on a personal…

Instrumentation and Methods for Astrophysics · Physics 2021-09-29 Kieran Leschinski , Hugo Buddelmeijer , Oliver Czoske , Miguel Verdugo , Gijs Verdoes-Kleijn , Werner Zeilinger

Hyperspectral cameras provide numerous advantages in terms of the utility of the data captured. They capture hundreds of data points per sample (pixel) instead of only the few of RGB or multispectral camera systems. Aerial systems sense…

Image and Video Processing · Electrical Eng. & Systems 2026-01-09 Thomas P. Watson , Eddie L. Jacobs

Phase contrast techniques, such as differential interference contrast (DIC) microscopy, are widely used to provide morphological images of unstained biological samples. The trans-illumination geometry required for these techniques has…

Optics · Physics 2015-03-13 Tim N. Ford , Kengyeh K. Chu , Jerome Mertz

FITS (Flexible Image Transport System) is a common format for astronomical data storage. It was first standardised in the early 1980s. Even though astronomical data is now processed mostly using software, visual data inspection by a human…

Instrumentation and Methods for Astrophysics · Physics 2019-02-19 Matwey Kornilov , Konstantin Malanchev

Fourier Ptychographic Microscopy (FPM) is a computational technique that achieves a large space-bandwidth product imaging. It addresses the challenge of balancing a large field of view and high resolution by fusing information from multiple…

Optics · Physics 2023-04-21 Ruiqing Sun , Delong Yang , Yao Hu , Qun Hao , Xin Li , Shaohui Zhang

Free-moving object reconstruction from monocular video remains challenging, particularly without reliable pose or depth cues and under arbitrary object motion. We introduce OnlineSplatter, a novel online feed-forward framework generating…

Computer Vision and Pattern Recognition · Computer Science 2025-10-24 Mark He Huang , Lin Geng Foo , Christian Theobalt , Ying Sun , De Wen Soh

This paper introduces the Oilfield Pollutant Graphical Model (OPGM), an innovative approach designed to improve the benchmarking and uncertainty analysis of greenhouse gas (GHG) emissions in oilfields. Building on the robust foundation…

Data Analysis, Statistics and Probability · Physics 2024-01-19 Cedric Fraces Gasmi , Wennan Long

A pseudo-outcrop visualization is demonstrated for borehole and full-diameter rock core images to augment the ubiquitous unwrapped cylinder view and thereby to assist non-specialist interpreters. The pseudo-outcrop visualization is…

In this article, we present a novel scheme for segmenting the image boundary (with the background) in optoacoustic small animal in vivo imaging systems. The method utilizes a multiscale edge detection algorithm to generate a binary edge…

Ultrasound vascular imaging is limited by acoustic diffraction, restricting visualization of microvessels essential for understanding organ function and disease. Label-free super-resolution methods exploiting endogenous red blood cells have…

We demonstrate swept-source optical coherence tomography in real-time by high throughput digital Fresnel hologram rendering from optically-acquired interferograms with a high-speed camera. The interferogram stream is spatially rescaled with…