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In neural circuits, synaptic strengths influence neuronal activity by shaping network dynamics, and neuronal activity influences synaptic strengths through activity-dependent plasticity. Motivated by this fact, we study a recurrent-network…

Neurons and Cognition · Quantitative Biology 2024-01-12 David G. Clark , L. F. Abbott

Multipotent stem or progenitor cells undergo a sequential series of binary fate decisions, which ultimately generate the diversity of differentiated cells. Efforts to understand cell fate control have focused on simple gene regulatory…

Molecular Networks · Quantitative Biology 2009-09-15 David V. Foster , Jacob G. Foster , Sui Huang , Stuart A. Kauffman

In this contribution, we have considered the collective behavior of the two as well as the network of heterogeneous coupled Hindmarsh Rose (HR) neurons. The heterogeneous models were made of a memristive 2D (HR) and the traditional 3D HR…

Neurons and Cognition · Quantitative Biology 2023-02-24 Zeric Tabekoueng Njitacke , Sishu Shankar Muni , Soumyajit Seth , Jan Awrejcewicz , Jacques Kengne

The biological processes that execute complex multiple functions, such as cell cycle, must ensure the order of sequential events and keep the dynamic robustness against various fluctuations. Here, we examine the dynamic mechanism and the…

Molecular Networks · Quantitative Biology 2020-04-22 Yao Zhao , Dedi Wang , Zhiwen Zhang , Ying Lu , Xiaojing Yang , Qi Ouyang , Chao Tang , Fangting Li

Understanding relationship between noisy dynamics and biological network architecture is a fundamentally important question, particularly in order to elucidate how cells encode and process information. We analytically and numerically…

Molecular Networks · Quantitative Biology 2011-10-12 Jaewook Joo , Jinmyung Choi

A simple model that replicates the dynamics of spiking and spiking-bursting activity of real biological neurons is proposed. The model is a two-dimensional map which contains one fast and one slow variable. The mechanisms behind generation…

Chaotic Dynamics · Physics 2009-11-07 Nikolai F. Rulkov

This paper examines how weak synaptic coupling can achieve rapid synchronization in heterogeneous networks. The assumptions aim at capturing the key mathematical properties that make this possible for biophysical networks. In particular,…

Systems and Control · Electrical Eng. & Systems 2023-12-01 Jin Gyu Lee , Rodolphe Sepulchre

To explain the differentiation of stem cells in terms of dynamical systems theory, models of interacting cells with intracellular protein expression dynamics are analyzed and simulated. Simulations were carried out for all possible protein…

Cell Behavior · Quantitative Biology 2015-06-15 Yusuke Goto , Kunihiko Kaneko

Recent evidence in rodent cerebral cortex and olfactory bulb suggests that short-term dynamics of excitatory synaptic transmission is correlated to stereotypical connectivity motifs. It was observed that neurons with short-term facilitating…

Neurons and Cognition · Quantitative Biology 2016-04-08 Eleni Vasilaki , Michele Giugliano

Dynamics and function of neuronal networks are determined by their synaptic connectivity. Current experimental methods to analyze synaptic network structure on the cellular level, however, cover only small fractions of functional neuronal…

Neurons and Cognition · Quantitative Biology 2015-07-28 Yury V. Zaytsev , Abigail Morrison , Moritz Deger

We study the emergent dynamics of a network of synaptically coupled slow-fast oscillators. Synaptic coupling provides a network-level positive feedback mechanism that cooperates with cellular-level positive feedback to ignite in-phase…

Chaotic Dynamics · Physics 2021-10-06 Omar Juarez-Alvarez , Alessio Franci

Constructing electronic models of neurons has several applications including reproducing dynamics of biological neurons and their networks and neuroprosthetics. In the brain, most neurons themselves are in a non-oscillatory mode, and brain…

Adaptation and Self-Organizing Systems · Physics 2023-05-09 Nikita M. Egorov , Marina V. Sysoeva , Vladimir I. Ponomarenko , Ilya V. Sysoev

Dynamical systems with a coupled cell network structure can display synchronous solutions, spectral degeneracies and anomalous bifurcation behavior. We explain these phenomena here for homogeneous networks, by showing that every homogeneous…

Dynamical Systems · Mathematics 2013-04-05 Bob Rink , Jan Sanders

The cooperative behavior of neurons and neuronal areas associated with the synchronization behavior proves to be a fundamental neural mechanism. In addition, abnormal levels of synchronization have been related to unhealthy neural…

Biological Physics · Physics 2023-11-16 Bruno R. R. Boaretto

Cortical activity in-vivo displays relaxational time scales much longer than the membrane time constant of the neurons or the deactivation time of ionotropic synaptic conductances. The mechanisms responsible for such slow dynamics are not…

Disordered Systems and Neural Networks · Physics 2025-08-07 Ferdinand Tixidre , Gianluigi Mongillo , Alessandro Torcini

Networks of randomly connected neurons are among the most popular models in theoretical neuroscience. The connectivity between neurons in the cortex is however not fully random, the simplest and most prominent deviation from randomness…

Neurons and Cognition · Quantitative Biology 2018-07-09 Daniel Martí , Nicolas Brunel , Srdjan Ostojic

In this work, we propose a dynamical systems perspective on the modeling of sepsis and its organ-damaging consequences. We develop a functional two-layer network model for sepsis based upon the interaction of parenchymal cells and immune…

Adaptation and Self-Organizing Systems · Physics 2022-03-28 Rico Berner , Jakub Sawicki , Max Thiele , Thomas Löser , Eckehard Schöll

Networks of fast-spiking interneurons are crucial for the generation of neural oscillations in the brain. Here we study the synchronous behavior of interneuronal networks that are coupled by delayed inhibitory and fast electrical synapses.…

Neurons and Cognition · Quantitative Biology 2012-06-22 Daqing Guo , Qingyun Wang , Matjaz Perc

Neural circuits in the brain perform a variety of essential functions, including input classification, pattern completion, and the generation of rhythms and oscillations that support processes such as breathing and locomotion. There is also…

Neurons and Cognition · Quantitative Biology 2024-10-16 Juliana Londono Alvarez

We propose and demonstrate the use of a minimal 2$\theta$ model for endogenous bursters coupled in 3-cell neural circuits. This 2$\theta$ model offers the benefit of simplicity of designing larger neural networks along with an acute…

Neurons and Cognition · Quantitative Biology 2020-08-11 Aaron Kelley , Andrey L. Shilnikov