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Processing-In-Memory (PIM) architectures offer a promising approach to accelerate Graph Neural Network (GNN) training and inference. However, various PIM devices such as ReRAM, FeFET, PCM, MRAM, and SRAM exist, with each device offering…

In this dissertation, we propose a memory and computing coordinated methodology to thoroughly exploit the characteristics and capabilities of the GPU-based heterogeneous system to effectively optimize applications' performance and privacy.…

Cryptography and Security · Computer Science 2022-09-07 Zhendong Wang , Yang Hu

Graph Neural Networks (GNNs) offer a compact and computationally efficient way to learn embeddings and classifications on graph data. GNN models are frequently large, making distributed minibatch training necessary. The primary contribution…

Machine Learning · Computer Science 2024-04-22 Alok Tripathy , Katherine Yelick , Aydin Buluc

High-performance deep learning depends on efficient tensor programs. In recent years, automatic tensor program optimization, also known as tensor compilation, has emerged as the primary approach to generating efficient tensor programs.…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-18 Hangda Liu , Boyu Diao , Yu Yang , Wenxin Chen , Xiaohui Peng , Yongjun Xu

Peptide-based drugs can bind to protein interaction sites that small molecules often cannot, and are easier to produce than large protein drugs. However, designing effective peptide binders is difficult. A typical peptide has an enormous…

Biomolecules · Quantitative Biology 2025-11-19 Xiaoqiong Xia , Cesar de la Fuente-Nunez

The Projected Gradient Descent (PGD) algorithm is a widely used and efficient first-order method for solving constrained optimization problems due to its simplicity and scalability in large design spaces. Building on recent advancements in…

Optimization and Control · Mathematics 2025-06-18 Lucka Barbeau , Marc-Étienne Lamarche-Gagnon , Florin Ilinca

Massively multicore processors, such as Graphics Processing Units (GPUs), provide, at a comparable price, a one order of magnitude higher peak performance than traditional CPUs. This drop in the cost of computation, as any…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-11-18 Samer Al-Kiswany , Abdullah Gharaibeh , Matei Ripeanu

The increasing demand for memory in hyperscale applications has led to memory becoming a large portion of the overall datacenter spend. The emergence of coherent interfaces like CXL enables main memory expansion and offers an efficient…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-30 Hasan Al Maruf , Hao Wang , Abhishek Dhanotia , Johannes Weiner , Niket Agarwal , Pallab Bhattacharya , Chris Petersen , Mosharaf Chowdhury , Shobhit Kanaujia , Prakash Chauhan

The Extended Finite State Machine (EFSM) is one of the most popular modeling approaches for model-based testing. However, EFSM-based test case generation is susceptible to the infeasible (inexecutable) path problem, which stems from the…

Software Engineering · Computer Science 2022-09-22 Zhijie Pan , Ting Shu , Zuohua Ding

Graph neural network (GNN) inference faces significant bottlenecks in preprocessing, which often dominate overall inference latency. We introduce AutoGNN, an FPGA-based accelerator designed to address these challenges by leveraging FPGA's…

In this paper we present a novel algorithm for automatic performance testing that uses an online variant of the Generative Adversarial Network (GAN) to optimize the test generation process. The objective of the proposed approach is to…

Software Engineering · Computer Science 2021-04-23 Ivan Porres , Hergys Rexha , Sébastien Lafond

Gaussian Process Regression (GPR) is an important type of supervised machine learning model with inherent uncertainty measure in its predictions. We propose a new framework, nuGPR, to address the well-known challenge of high computation…

Machine Learning · Computer Science 2025-10-15 Ziqi Zhao , Vivek Sarin

Recent studies on transfer learning have shown that selectively fine-tuning a subset of layers or customizing different learning rates for each layer can greatly improve robustness to out-of-distribution (OOD) data and retain generalization…

Computer Vision and Pattern Recognition · Computer Science 2023-03-29 Junjiao Tian , Xiaoliang Dai , Chih-Yao Ma , Zecheng He , Yen-Cheng Liu , Zsolt Kira

Witnessing the advancing scale and complexity of chip design and benefiting from high-performance computation technologies, the simulation of Very Large Scale Integration (VLSI) Circuits imposes an increasing requirement for acceleration…

Data Structures and Algorithms · Computer Science 2023-04-27 Weijie Fang , Yanggeng Fu , Jiaquan Gao , Longkun Guo , Gregory Gutin , Xiaoyan Zhang

Graph Neural Networks (GNN) is an emerging field for learning on non-Euclidean data. Recently, there has been increased interest in designing GNN that scales to large graphs. Most existing methods use "graph sampling" or "layer-wise…

Machine Learning · Computer Science 2021-09-03 Ming Chen , Zhewei Wei , Bolin Ding , Yaliang Li , Ye Yuan , Xiaoyong Du , Ji-Rong Wen

In real-life applications, most optimization problems are variants of well-known combinatorial optimization problems, including additional constraints to fit with a particular use case. Usually, efficient algorithms to handle a restricted…

Discrete Mathematics · Computer Science 2025-01-24 Sébastien Martin , Pierre Bauguion , Youcef Magnouche , Jérémie Leguay

Genetic Programming (GP) is a computationally intensive technique which is naturally parallel in nature. Consequently, many attempts have been made to improve its run-time from exploiting highly parallel hardware such as GPUs. However, a…

Neural and Evolutionary Computing · Computer Science 2018-09-21 Darren M. Chitty

As one of the most fundamental problems in graph processing, the Single-Source Shortest Path (SSSP) problem plays a critical role in numerous application scenarios. However, existing GPU-based solutions remain inefficient, as they typically…

Data Structures and Algorithms · Computer Science 2026-02-11 Zhengding Hu , Jingwen Sun , Le Jiang , Yuhao Wang , Junqing Lin , Yi Zong , Guangzhong Sun

A major bottleneck in scenario-based Sample Average Approximation (SAA) for stochastic programming (SP) is the cost of solving an exact second-stage problem for every scenario, especially when each scenario contains an NP-hard combinatorial…

Optimization and Control · Mathematics 2026-05-12 Jingyi Zhao , Linxin Yang , Haohua Zhang , Qile He , Tian Ding

Probabilistic Circuits (PCs) are a promising avenue for probabilistic modeling. They combine advantages of probabilistic graphical models (PGMs) with those of neural networks (NNs). Crucially, however, they are tractable probabilistic…

Machine Learning · Computer Science 2021-06-07 Anji Liu , Guy Van den Broeck