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Elliptic partial differential equations (PDEs) frequently arise in continuum descriptions of physical processes relevant to science and engineering. Multilevel preconditioners represent a family of scalable techniques for solving discrete…

Mathematical Software · Computer Science 2016-04-26 Dave A. May , Patrick Sanan , Karl Rupp , Matthew G. Knepley , Barry F. Smith

The Smoothed Particles Hydrodynamics (SPH) is a particle-based, meshfree, Lagrangian method used to simulate multidimensional fluids with arbitrary geometries, most commonly employed in astrophysics, cosmology, and computational…

Computational Engineering, Finance, and Science · Computer Science 2022-12-21 Aurélien Cavelan , Rubén M. Cabezón , Michal Grabarczyk , Florina M. Ciorba

Python's flexibility and ease of use come at the cost of performance inefficiencies, requiring developers to rely on profilers to optimize execution. SCALENE, a high-performance CPU, GPU, and memory profiler, provides fine-grained insights…

Programming Languages · Computer Science 2025-02-17 Saem Hasan , Sanju Basak

This paper presents our work on designing scalable linear solvers for large-scale reservoir simulations. The main objective is to support implementation of parallel reservoir simulators on distributed-memory parallel systems, where MPI…

Mathematical Software · Computer Science 2017-01-24 Hui Liu , Zhangxin Chen

The evergrowing computational complexity of High Performance Computing applications is often met with an horizontal scalling of computing systems. Colaterally, each added node risks being a single point of failure to parallel programs,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-02-04 Marcos Irigoyen , Carla Santana , Ramon C. F Araújo , Samuel Xavier-de-Souza

Recent advances in both theory and methods have created opportunities to simulate biomolecular processes more efficiently using adaptive ensemble simulations. Ensemble-based simulations are used widely to compute a number of individual…

Computational Engineering, Finance, and Science · Computer Science 2020-09-14 Vivek Balasubramanian , Travis Jensen , Matteo Turilli , Peter Kasson , Michael Shirts , Shantenu Jha

The parallel linear equations solver capable of effectively using 1000+ processors becomes the bottleneck of large-scale implicit engineering simulations. In this paper, we present a new hierarchical parallel master-slave-structural…

Computational Physics · Physics 2015-06-11 Ran Xu , Bin Liu , Yuan Dong

OLTP applications with high workloads that cannot be served by a single server need to scale out to multiple servers. Typically, scaling out entails assigning a different partition of the application state to each server. But data…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-04-06 Habib Saissi , Marco Serafini , Neeraj Suri

The first generation of exascale systems will include a variety of machine architectures, featuring GPUs from multiple vendors. As a result, many developers are interested in adopting portable programming models to avoid maintaining…

Performance · Computer Science 2023-10-26 Esteban M. Rangel , S. John Pennycook , Adrian Pope , Nicholas Frontiere , Zhiqiang Ma , Varsha Madananth

Despite the fast advances in high-sigma yield analysis with the help of machine learning techniques in the past decade, one of the main challenges, the curse of dimensionality, which is inevitable when dealing with modern large-scale…

Computational Engineering, Finance, and Science · Computer Science 2022-12-06 Shuo Yin , Guohao Dai , Wei W. Xing

Vico et al. (2016) suggest a fast algorithm for computing volume potentials, beneficial to fields with problems requiring the solution of the free-space Poisson's equation, such as beam and plasma physics. Currently, the standard is the…

We present a new open-source cosmological code, called SWIFT, designed to solve the equations of hydrodynamics using a particle-based approach (Smooth Particle Hydrodynamics) on hybrid shared/distributed-memory architectures. SWIFT was…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-08-03 Matthieu Schaller , Pedro Gonnet , Aidan B. G. Chalk , Peter W. Draper

Subspace clustering (SC) is a popular method for dimensionality reduction of high-dimensional data, where it generalizes Principal Component Analysis (PCA). Recently, several methods have been proposed to enhance the robustness of PCA and…

Data Structures and Algorithms · Computer Science 2015-06-09 Sanghyuk Chun , Yung-Kyun Noh , Jinwoo Shin

Krylov methods are a key way of solving large sparse linear systems of equations, but suffer from poor strong scalabilty on distributed memory machines. This is due to high synchronization costs from large numbers of collective…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-14 Shelby Lockhart , Amanda Bienz , William Gropp , Luke Olson

The paper presents a prototype of the accelerator commissioning and simulation application toolkit based on the Unified Accelerator Libraries (UAL) framework. The existing UAL 1.x environment has been implemented as an open collection of…

Accelerator Physics · Physics 2007-05-23 N. Malitsky , J. Smith , J. Wei

Iterative solvers for large-scale linear systems such as Krylov subspace methods can diverge when the linear system is ill-conditioned, thus significantly reducing the applicability of these iterative methods in practice for…

Numerical Analysis · Mathematics 2025-07-24 Vasileios Kalantzis , Mark S. Squillante , Chai Wah Wu

This paper presents alpaqa, an open-source C++ implementation of an augmented Lagrangian method for nonconvex constrained numerical optimization, using the first-order PANOC algorithm as inner solver. The implementation is packaged as an…

Optimization and Control · Mathematics 2021-12-07 Pieter Pas , Mathijs Schuurmans , Panagiotis Patrinos

Many modern applications require the evaluation of analytical queries on large amounts of data. Such queries entail joins and heavy aggregations that often include user-defined functions (UDFs). The most efficient way to process these…

Databases · Computer Science 2015-01-07 Herald Kllapi , Panos Sakkos , Alex Delis , Dimitrios Gunopulos , Yannis Ioannidis

The need for computational resources grows as computational algorithms gain popularity in different sectors of the scientific community. This search has stimulated the development of several cloud platforms that abstract the complexity of…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-01-18 Henrique C. T. Santos , Luciano S. de Souza , Jonathan H. A. de Carvalho , Tiago A. E. Ferreira

We introduce the IBM Analog Hardware Acceleration Kit, a new and first of a kind open source toolkit to simulate analog crossbar arrays in a convenient fashion from within PyTorch (freely available at https://github.com/IBM/aihwkit). The…