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Packing transitions in the lowest energy structures of Li clusters as a function of size have been identified via simulated annealing. For N>21, the large $p$ character of Li leads to unexpected ionic structures. At N~25, a packing pattern…

chem-ph · Physics 2009-10-22 Ming Wen Sung , Ryoichi Kawai , John H. Weare

We identify the fundamental factors determining the microstructural (MS) statistics of granular systems, using numerical experiments on 2D assemblies of polydisperse frictional discs and studying the emergent properties of quadrons (Qs),…

Soft Condensed Matter · Physics 2017-02-14 Takashi Matsushima , Raphael Blumenfeld

When dense granular systems are exposed to external forcing, they evolve on the time scale that is typically related to the externally imposed one (shear or compression rate, for example). This evolution could be characterized by observing…

Soft Condensed Matter · Physics 2017-08-02 Lou Kondic , Miroslav Kramar , Lenka Kovalcinova , Konstantin Mischaikow

Structure fluctuations and conformational changes accompany all biological processes involving macromolecules. The paper presents a classification of protein residues based on the normalized equilibrium fluctuations of the residue centers…

Biological Physics · Physics 2015-05-30 Anatoly M. Ruvinsky , Tatsiana Kirys , Alexander V. Tuzikov , Ilya A. Vakser

Complex crystal structures are composed of multiple local environments, and how this type of order emerges spontaneously during crystal growth has yet to be fully understood. We study crystal growth across various structures and along…

Soft Condensed Matter · Physics 2024-06-03 Maya M. Martirossyan , Matthew Spellings , Hillary Pan , Julia Dshemuchadse

Responsive particles, such as biomacromolecules or hydrogels, display a broad and polymodal distribution of conformations and have thus the ability to change their properties (e.g, size, shape, charge density, etc.) substantially in…

Soft Condensed Matter · Physics 2020-10-28 Yi-Chen Lin , Benjamin Rotenberg , Joachim Dzubiella

By generalizing a geometric argument for frictionless spheres, a model is proposed for the jamming density $\phi_J$ of mechanically stable packings of bidisperse, frictional spheres. The monodisperse, $\mu_s$-dependent jamming density…

This paper analyzes the compaction behavior of assemblies composed of soft (elastic) spherical particles beyond the jammed state, using three-dimensional non-smooth contact dynamic simulations. The assemblies of particles are characterized…

Soft Condensed Matter · Physics 2021-09-09 Manuel Cárdenas-Barrantes , David Cantor , Jonathan Barés , Mathieu Renouf , Emilien Azéma

Recent progress on studies of the nanoscale mechanical responses in disordered systems has highlighted a strong degree of heterogeneity in the elastic moduli. In this contribution, using computer simulations, we study the elastic…

Soft Condensed Matter · Physics 2016-02-12 Hideyuki Mizuno , Leonardo E. Silbert , Matthias Sperl

The investigation of collective behaviour in dense assemblies of self-propelled active particles has been motivated by a wide range of biological phenomena. Of particular interest are dynamical transitions of cellular and sub-cellular…

Soft Condensed Matter · Physics 2023-12-05 Yagyik Goswami , G. V. Shivashankar , Srikanth Sastry

In this work we provide an overview of jamming transitions in two dimensional systems focusing on the limit of frictionless particle interactions in the absence of thermal fluctuations. We first discuss jamming in systems with short range…

Soft Condensed Matter · Physics 2017-12-06 C. Reichhardt , C. J. Olson Reichhardt

The effect of increasing structural disorder on the distribution of contact forces P(f), inside three dimensional particle assemblies is systematically studied using computer simulations of model granular packings. Starting from a…

Soft Condensed Matter · Physics 2011-08-02 Leonardo E. Silbert

Understanding how a flow turns into an amorphous solid is a fundamental challenge in statistical physics, during which no apparent structural ordering appears. In the athermal limit, the two states are connected by a well-defined jamming…

Soft Condensed Matter · Physics 2025-05-01 Yang Fu , Yuliang Jin , Deng Pan , Itamar Procaccia

We present the study of the landscape structure of athermal soft spheres both as a function of the packing fraction and of the energy. We find that, on approaching the jamming transition, the number of different configurations available to…

Statistical Mechanics · Physics 2020-05-20 Claudia Artiaco , Paolo Baldan , Giorgio Parisi

Assemblies of purely repulsive and frictionless particles, such as emulsions or hard spheres, display very curious properties near their jamming transition, which occurs at the random close packing for mono-disperse spheres. Although such…

Soft Condensed Matter · Physics 2014-11-19 Matthieu Wyart

The role of friction coefficient, $\mu$, on the jamming properties of disordered, particle packings is studied using computer simulations. Compressed, soft-sphere packings are brought towards the jamming transition - the point where a…

Soft Condensed Matter · Physics 2011-08-02 Leonardo E. Silbert

It is presented a numerical study on the unjamming packing fraction of bi- and polydisperse disk packings, which are generated through compression of a monodisperse crystal. In bidisperse systems, a fraction f_+ = 40% up to 80% of the total…

Statistical Mechanics · Physics 2010-10-14 Fabricio Q. Potiguar

We investigate the quantum dynamics of wave packets in a class of decorated lattices, both quasiperiodic and random, where a nominal quasi-one dimensionality is introduced at local levels, bringing in a deterministic or even random…

Disordered Systems and Neural Networks · Physics 2021-05-27 Arkajyoti Maity , Arunava Chakrabarti

For two decades now, the importance of microstructure in the mechanical behaviour of a large collection of grains has been a topic of intense research. Many approaches have been developed to study the microstructure in granular materials,…

Soft Condensed Matter · Physics 2020-03-06 K. P. Krishnaraj

We analyze the dynamics of a 3D granular packing composed of particles of irregular polyhedral shape confined inside a rectangular box with a retaining wall sub jected to horizontal harmonic forcing. The simulations are performed by means…

Classical Physics · Physics 2011-07-12 Émilien Azema , Farhang Radjaï , Robert Peyroux , Vincent Richefeu , Gilles Saussine