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Functional MRI (fMRI) is commonly used for interpreting neural activities across the brain. Numerous accelerated fMRI techniques aim to provide improved spatiotemporal resolutions. Among these, simultaneous multi-slice (SMS) imaging has…

Image and Video Processing · Electrical Eng. & Systems 2021-05-11 Omer Burak Demirel , Burhaneddin Yaman , Logan Dowdle , Steen Moeller , Luca Vizioli , Essa Yacoub , John Strupp , Cheryl A. Olman , Kâmil Uğurbil , Mehmet Akçakaya

Deep learning has been used to image compressive sensing (CS) for enhanced reconstruction performance. However, most existing deep learning methods train different models for different subsampling ratios, which brings additional hardware…

Computer Vision and Pattern Recognition · Computer Science 2021-01-25 Zhonghao Zhang , Yipeng Liu , Xingyu Cao , Fei Wen , Ce Zhu

Purpose: A fast data-driven optimization approach, named bias-accelerated subset selection (BASS), is proposed for learning efficacious sampling patterns (SPs) with the purpose of reducing scan time in large-dimensional parallel MRI.…

Signal Processing · Electrical Eng. & Systems 2020-11-05 Marcelo V. W. Zibetti , Gabor T. Herman , Ravinder R. Regatte

Image compression is a critical tool in decreasing the cost of storage and improving the speed of transmission over the internet. While deep learning applications for natural images widely adopts the usage of lossy compression techniques,…

Image and Video Processing · Electrical Eng. & Systems 2024-09-26 Anvar Kurmukov , Bogdan Zavolovich , Aleksandra Dalechina , Vladislav Proskurov , Boris Shirokikh

Deep learning holds great promise in the reconstruction of undersampled Magnetic Resonance Imaging (MRI) data, providing new opportunities to escalate the performance of rapid MRI. In existing deep learning-based reconstruction methods,…

Computer Vision and Pattern Recognition · Computer Science 2018-12-11 Fang Liu , Lihua Chen , Richard Kijowski , Li Feng

Deep convolutional neural networks (CNNs) are state-of-the-art for semantic image segmentation, but typically require many labeled training samples. Obtaining 3D segmentations of medical images for supervised training is difficult and labor…

Computer Vision and Pattern Recognition · Computer Science 2019-07-29 Zhenlin Xu , Marc Niethammer

High-dimensional hyperspectral imaging (HSI) enables the visualization of ultrafast molecular dynamics and complex, heterogeneous spectra. However, applying this capability to resolve spatially varying vibrational couplings in…

Image and Video Processing · Electrical Eng. & Systems 2026-04-09 Chi-Jui Ho , Harsh Bhakta , Wei Xiong , Nicholas Antipa

Magnetic Resonance Spectroscopic Imaging (MRSI) is a powerful tool for non-invasive mapping of brain metabolites, providing critical insights into neurological conditions. However, its utility is often limited by missing or corrupted data…

Image and Video Processing · Electrical Eng. & Systems 2025-05-13 Tan-Hanh Pham , Ovidiu C. Andronesi , Xianqi Li , Kim-Doang Nguyen

We present a novel approach to implement compressive sensing in laser scanning microscopes (LSM), specifically in image scanning microscopy (ISM), using a single-photon avalanche diode (SPAD) array detector. Our method addresses two…

Image and Video Processing · Electrical Eng. & Systems 2023-07-20 Ajay Gunalan , Marco Castello , Simonluca Piazza , Shunlei Li , Alberto Diaspro , Leonardo S. Mattos , Paolo Bianchini

Deep learning (DL) has emerged as a tool for improving accelerated MRI reconstruction. A common strategy among DL methods is the physics-based approach, where a regularized iterative algorithm alternating between data consistency and a…

Image and Video Processing · Electrical Eng. & Systems 2020-07-03 Burhaneddin Yaman , Seyed Amir Hossein Hosseini , Steen Moeller , Jutta Ellermann , Kâmil Uǧurbil , Mehmet Akçakaya

Magnetic resonance imaging (MRI) is a non-invasive imaging modality and provides comprehensive anatomical and functional insights into the human body. However, its long acquisition times can lead to patient discomfort, motion artifacts, and…

Computer Vision and Pattern Recognition · Computer Science 2025-07-21 Mojtaba Safari , Zach Eidex , Chih-Wei Chang , Richard L. J. Qiu , Xiaofeng Yang

Snapshot hyperspectral imaging systems acquire spectral data cubes through compressed sensing. Recently, diffractive snapshot spectral imaging (DSSI) methods have attracted significant attention. While various optical designs and…

Image and Video Processing · Electrical Eng. & Systems 2025-07-08 Zhengyue Zhuge , Jiahui Xu , Shiqi Chen , Hao Xu , Yueting Chen , Zhihai Xu , Huajun Feng

High spatial and temporal resolution across the whole brain is essential to accurately resolve neural activities in fMRI. Therefore, accelerated imaging techniques target improved coverage with high spatio-temporal resolution. Simultaneous…

Image and Video Processing · Electrical Eng. & Systems 2021-05-13 Omer Burak Demirel , Burhaneddin Yaman , Logan Dowdle , Steen Moeller , Luca Vizioli , Essa Yacoub , John Strupp , Cheryl A. Olman , Kâmil Uğurbil , Mehmet Akçakaya

The task of automatically segmenting 3-D surfaces representing boundaries of objects is important for quantitative analysis of volumetric images, and plays a vital role in biomedical image analysis. Recently, graph-based methods with a…

Computer Vision and Pattern Recognition · Computer Science 2018-01-10 Abhay Shah , Michael Abramoff , Xiaodong Wu

Dynamic Magnetic Resonance Imaging (MRI) is a crucial non-invasive method used to capture the movement of internal organs and tissues, making it a key tool for medical diagnosis. However, dynamic MRI faces a major challenge: long…

Image and Video Processing · Electrical Eng. & Systems 2024-09-20 Tamir Shor , Chaim Baskin , Alex Bronstein

Simultaneous multislice (SMS) imaging is a one of the acceleration technique of magnetic resonance imaging. SMS requires accurate sensitivity distributions in the slice plane for each receiving coil. This requirement is difficult to satisfy…

Medical Physics · Physics 2024-03-04 Satoshi Ito , Yuki Sato , Naoya Endo , Shohei Ouchi

To increase the flexibility and scalability of deep neural networks for image reconstruction, a framework is proposed based on bandpass filtering. For many applications, sensing measurements are performed indirectly. For example, in…

Computer Vision and Pattern Recognition · Computer Science 2018-11-27 Joseph Y. Cheng , Feiyu Chen , Marcus T. Alley , John M. Pauly , Shreyas S. Vasanawala

Typical Magnetic Resonance Imaging (MRI) scan may take 20 to 60 minutes. Reducing MRI scan time is beneficial for both patient experience and cost considerations. Accelerated MRI scan may be achieved by acquiring less amount of k-space data…

Image and Video Processing · Electrical Eng. & Systems 2020-01-15 Pak Lun Kevin Ding , Zhiqiang Li , Yuxiang Zhou , Baoxin Li

In this paper, we propose a novel interpretation method tailored to histological Whole Slide Image (WSI) processing. A Deep Neural Network (DNN), inspired by Bag-of-Features models is equipped with a Multiple Instance Learning (MIL) branch…

Computer Vision and Pattern Recognition · Computer Science 2019-04-17 Magdalini Paschali , Muhammad Ferjad Naeem , Walter Simson , Katja Steiger , Martin Mollenhauer , Nassir Navab

Novel data acquisition schemes have been an emerging need for scanning microscopy based imaging techniques to reduce the time in data acquisition and to minimize probing radiation in sample exposure. Varies sparse sampling schemes have been…

Image and Video Processing · Electrical Eng. & Systems 2018-07-09 Yan Zhang , Xiang Huang , Nicola Ferrier , Emine B. Gulsoy , Charudatta Phatak