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We introduce a general-purpose framework for interconnecting scientific simulation programs using a homogeneous, unified interface. Our framework is intrinsically parallel, and conveniently separates all component numerical modules in…

Instrumentation and Methods for Astrophysics · Physics 2015-06-04 Simon Portegies Zwart , Steve McMillan , Arjen van Elteren , Inti Pelupessy , Nathan de Vries

Solving complex fluid-structure interaction (FSI) problems, which are described by nonlinear partial differential equations, is crucial in various scientific and engineering applications. Traditional computational fluid dynamics based…

Computational Physics · Physics 2023-03-24 Xiantao Fan , Jian-Xun Wang

In many applications, one wants to model physical systems consisting of two different physical processes in two different domains that are coupled across a common interface. A crucial challenge is then that the solutions of the two…

Numerical Analysis · Mathematics 2020-01-17 Karl Erik Holter , Miroslav Kuchta , Kent-Andre Mardal

CDFCI is a shared-memory parallel numerical program for computing low-lying eigenpairs of large-scale, non-relativistic fermionic Hamiltonians. The software is designed to handle a broad class of many-body quantum models, including both ab…

Computational Physics · Physics 2026-05-08 Yuejia Zhang , Zhe Wang , Jianfeng Lu , Yingzhou Li

Multi-fluid flows are found in various industrial processes, including metal injection molding and 3D printing. The accuracy of multi-fluid flow modeling is determined by how well interfaces and capillary forces are represented. In this…

Numerical Analysis · Mathematics 2024-05-10 Michel Nohra , Steven Dufour

We consider the design of structure-preserving discretization methods for the solution of systems of boundary controlled Partial Differential Equations (PDEs) thanks to the port-Hamiltonian formalism. We first provide a novel general…

Numerical Analysis · Mathematics 2020-09-30 Andrea Brugnoli , Ghislain Haine , Anass Serhani , Xavier Vasseur

The numerical simulation of the diffusion MRI signal arising from complex tissue micro-structures is helpful for understanding and interpreting imaging data as well as for designing and optimizing MRI sequences. The discretization of the…

Computational Engineering, Finance, and Science · Computer Science 2019-10-23 Van-Dang Nguyen , Massimiliano Leoni , Tamara Dancheva , Johan Jansson , Johan Hoffman , Demian Wassermann , Jing-Rebecca Li

AFSI is a novel, open-source fluid-structure interaction (FSI) solver that extends the capabilities of the FEniCS finite element library through an immersed boundary (IB) framework. Designed to simulate large deformations in hyperelastic…

Computational Physics · Physics 2025-09-03 Pengfei Ma , Li Cai , Xuan Wang , Hao Gao

We present a new framework for the simultaneous optimiziation of both the topology as well as the relative density grading of cellular structures and materials, also known as lattices. Due to manufacturing constraints, the optimization…

Computational Engineering, Finance, and Science · Computer Science 2025-05-27 Jonathan Stollberg , Tarun Gangwar , Oliver Weeger , Dominik Schillinger

The connection and eventual integration of High-Performance Computing (HPC) with Quantum Computing (QC) represents a transformative advancement in computational technology, promising significant enhancements in solving complex, previously…

This manuscript is a collection of problems and solutions related to modeling the cryosphere using the finite element software FEniCS. Included is an introduction to the finite element method; solutions to a variety of problems in one, two,…

Geophysics · Physics 2016-09-16 Evan M. Cummings

Convex variational problems arise in many fields ranging from image processing to fluid and solid mechanics communities. Interesting applications usually involve non-smooth terms which require well-designed optimization algorithms for their…

Optimization and Control · Mathematics 2019-12-02 Jeremy Bleyer

The present manuscript presents a framework for automating the formulation and resolution of limit analysis problems in a very general manner. This framework relies on FEniCS domain-specific language and the representation of material…

Optimization and Control · Mathematics 2020-05-12 Jeremy Bleyer , Ghazi Hassen

Computational materials science and chemistry span vast knowledge domains and fractured software ecosystems. Although large language models (LLMs) have demonstrated research capabilities, scaling monolithic agents to manage the rigor and…

FEniCS Mechanics is a Python package to facilitate computational mechanics simulations. The Python library dolfin, from the FEniCS Project, is used to formulate and numerically solve the problem in variational form. The general balance laws…

Computational Engineering, Finance, and Science · Computer Science 2019-01-30 Miguel A. Rodriguez , Christoph M. Augustin , Shawn C. Shadden

Soft particles at fluid interfaces play an important role in many aspects of our daily life, such as the food industry, paints and coatings, and medical applications. Analytical methods are not capable of describing the emergent effects of…

Computational Physics · Physics 2019-09-25 Maarten Wouters , Othmane Aouane , Timm Krueger , Jens Harting

We present a methodology combining neural networks with physical principle constraints in the form of partial differential equations (PDEs). The approach allows to train neural networks while respecting the PDEs as a strong constraint in…

Numerical Analysis · Mathematics 2021-09-06 Sebastian K. Mitusch , Simon W. Funke , Miroslav Kuchta

Brain-computer interfaces (BCIs) enable direct communication between the brain and external devices. This review highlights the core decoding algorithms that enable multimodal BCIs, including a dissection of the elements, a unified view of…

Human-Computer Interaction · Computer Science 2025-02-06 Siyang Li , Hongbin Wang , Xiaoqing Chen , Dongrui Wu

In this work, we study physics-informed neural networks (PINNs) constrained by partial differential equations (PDEs) and their application in approximating PDEs with two characteristic scales. From a continuous perspective, our formulation…

Optimization and Control · Mathematics 2024-09-06 Michael Hintermüller , Denis Korolev

In this paper, we combine the multiscale flnite element method to propose an algorithm for solving the non-stationary Stokes-Darcy model, where the permeability coefflcient in the Darcy region exhibits multiscale characteristics. Our…

Numerical Analysis · Mathematics 2024-03-19 Yachen Hong , Wenhan Zhang , Lina Zhao , Haibiao Zheng
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