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Accurate segmentation of organelle instances from electron microscopy (EM) images plays an essential role in many neuroscience researches. However, practical scenarios usually suffer from high annotation costs, label scarcity, and large…

Computer Vision and Pattern Recognition · Computer Science 2024-04-02 Dafei Qiu , Shan Xiong , Jiajin Yi , Jialin Peng

Annotation-efficient segmentation of the numerous mitochondria instances from various electron microscopy (EM) images is highly valuable for biological and neuroscience research. Although unsupervised domain adaptation (UDA) methods can…

Computer Vision and Pattern Recognition · Computer Science 2026-05-04 Shan Xiong , Jiabao Chen , Ye Wang , Jialin Peng

Domain adaptive segmentation (DAS) of numerous organelle instances from large-scale electron microscopy (EM) is a promising way to enable annotation-efficient learning. Inspired by SAM, we propose a promptable multitask framework, namely…

Computer Vision and Pattern Recognition · Computer Science 2025-09-24 Jiabao Chen , Shan Xiong , Jialin Peng

Learning semantic segmentation models requires a huge amount of pixel-wise labeling. However, labeled data may only be available abundantly in a domain different from the desired target domain, which only has minimal or no annotations. In…

Computer Vision and Pattern Recognition · Computer Science 2020-08-13 Sujoy Paul , Yi-Hsuan Tsai , Samuel Schulter , Amit K. Roy-Chowdhury , Manmohan Chandraker

It has been shown that traditional deep learning methods for electronic microscopy segmentation usually suffer from low transferability when samples and annotations are limited, while large-scale vision foundation models are more robust…

Image and Video Processing · Electrical Eng. & Systems 2024-03-14 Yiran Wang , Li Xiao

Weakly supervised segmentation methods have gained significant attention due to their ability to reduce the reliance on costly pixel-level annotations during model training. However, the current weakly supervised nuclei segmentation…

Image and Video Processing · Electrical Eng. & Systems 2025-02-04 Ye Zhang , Yifeng Wang , Zijie Fang , Hao Bian , Linghan Cai , Ziyue Wang , Yongbing Zhang

The performance of object detection, to a great extent, depends on the availability of large annotated datasets. To alleviate the annotation cost, the research community has explored a number of ways to exploit unlabeled or weakly labeled…

Computer Vision and Pattern Recognition · Computer Science 2021-05-25 Shijie Fang , Yuhang Cao , Xinjiang Wang , Kai Chen , Dahua Lin , Wayne Zhang

In the last years, automated segmentation has become a necessary tool for volume electron microscopy (EM) imaging. So far, the best performing techniques have been largely based on fully supervised encoder-decoder CNNs, requiring a…

Computer Vision and Pattern Recognition · Computer Science 2018-12-19 Joris Roels , Julian Hennies , Yvan Saeys , Wilfried Philips , Anna Kreshuk

Weakly Supervised Object Localization (WSOL) models enable joint classification and region-of-interest localization in histology images using only image-class supervision. When deployed in a target domain, distributions shift remains a…

Computer Vision and Pattern Recognition · Computer Science 2026-03-16 Alexis Guichemerre , Banafsheh Karimian , Soufiane Belharbi , Natacha Gillet , Nicolas Thome , Pourya Shamsolmoali , Mohammadhadi Shateri , Luke McCaffrey , Eric Granger

Medical image segmentation typically necessitates a large and precisely annotated dataset. However, obtaining pixel-wise annotation is a labor-intensive task that requires significant effort from domain experts, making it challenging to…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Heng Cai , Lei Qi , Qian Yu , Yinghuan Shi , Yang Gao

Unsupervised domain adaptation (UDA) for semantic segmentation addresses the cross-domain problem with fine source domain labels. However, the acquisition of semantic labels has always been a difficult step, many scenarios only have weak…

Computer Vision and Pattern Recognition · Computer Science 2022-10-06 Shengjie Liu , Chuang Zhu , Wenqi Tang

Image segmentation is a fundamental task in the field of imaging and vision. Supervised deep learning for segmentation has achieved unparalleled success when sufficient training data with annotated labels are available. However, annotation…

Image and Video Processing · Electrical Eng. & Systems 2023-04-10 Hongrun Zhang , Liam Burrows , Yanda Meng , Declan Sculthorpe , Abhik Mukherjee , Sarah E Coupland , Ke Chen , Yalin Zheng

The development of learning-based methods has greatly improved the detection of synapses from electron microscopy (EM) images. However, training a model for each dataset is time-consuming and requires extensive annotations. Additionally, it…

Computer Vision and Pattern Recognition · Computer Science 2023-09-01 Qi Chen , Wei Huang , Yueyi Zhang , Zhiwei Xiong

We describe a simple method for unsupervised domain adaptation, whereby the discrepancy between the source and target distributions is reduced by swapping the low-frequency spectrum of one with the other. We illustrate the method in…

Computer Vision and Pattern Recognition · Computer Science 2020-04-14 Yanchao Yang , Stefano Soatto

Current state-of-the-art methods for object detection rely on annotated bounding boxes of large data sets for training. However, obtaining such annotations is expensive and can require up to hundreds of hours of manual labor. This poses a…

Computer Vision and Pattern Recognition · Computer Science 2025-08-04 Hannah Kniesel , Leon Sick , Tristan Payer , Tim Bergner , Kavitha Shaga Devan , Clarissa Read , Paul Walther , Timo Ropinski

Weakly supervised object localization (WSOL) focuses on localizing objects only with the supervision of image-level classification masks. Most previous WSOL methods follow the classification activation map (CAM) that localizes objects based…

Computer Vision and Pattern Recognition · Computer Science 2022-03-28 Lei Zhu , Qi She , Qian Chen , Yunfei You , Boyu Wang , Yanye Lu

Unsupervised domain adaptation (UDA) is important for applications where large scale annotation of representative data is challenging. For semantic segmentation in particular, it helps deploy on real "target domain" data models that are…

Computer Vision and Pattern Recognition · Computer Science 2019-08-20 Tuan-Hung Vu , Himalaya Jain , Maxime Bucher , Matthieu Cord , Patrick Pérez

Annotation of medical images has been a major bottleneck for the development of accurate and robust machine learning models. Annotation is costly and time-consuming and typically requires expert knowledge, especially in the medical domain.…

Computer Vision and Pattern Recognition · Computer Science 2020-01-08 Holger Roth , Ling Zhang , Dong Yang , Fausto Milletari , Ziyue Xu , Xiaosong Wang , Daguang Xu

Mask-based annotation of medical images, especially for 3D data, is a bottleneck in developing reliable machine learning models. Using minimal-labor user interactions (UIs) to guide the annotation is promising, but challenges remain on best…

Computer Vision and Pattern Recognition · Computer Science 2020-09-08 Ashwin Raju , Zhanghexuan Ji , Chi Tung Cheng , Jinzheng Cai , Junzhou Huang , Jing Xiao , Le Lu , ChienHung Liao , Adam P. Harrison

Weakly-supervised salient object detection (WSOD) aims to develop saliency models using image-level annotations. Despite of the success of previous works, explorations on an effective training strategy for the saliency network and accurate…

Computer Vision and Pattern Recognition · Computer Science 2021-09-07 Yongri Piao , Jian Wang , Miao Zhang , Zhengxuan Ma , Huchuan Lu
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