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Neuro-electronic hybrid promises to bring up a model architecture for computing. Such computing architecture could help to bring the power of biological connection and electronic circuits together for better computing paradigm. Such…

Neurons and Cognition · Quantitative Biology 2017-02-14 Sayan Biswas

An object-oriented combinator chemistry was used to construct an artificial organism with a system architecture possessing characteristics necessary for organisms to evolve into more complex forms. This architecture supports modularity by…

Neural and Evolutionary Computing · Computer Science 2018-05-17 Lance R. Williams

Large language models (LLMs) are transforming cellular biology by enabling the development of "virtual cells"--computational systems that represent, predict, and reason about cellular states and behaviors. This work provides a comprehensive…

Computation and Language · Computer Science 2025-10-10 Krinos Li , Xianglu Xiao , Shenglong Deng , Lucas He , Zijun Zhong , Yuanjie Zou , Zhonghao Zhan , Zheng Hui , Weiye Bao , Guang Yang

Artificial ants are "small" units, moving autonomously on a shared, dynamically changing "space", directly or indirectly exchanging some kind of information. Artificial ants are frequently conceived as a paradigm for collective adaptive…

Artificial Intelligence · Computer Science 2022-08-09 Peter Fettke , Wolfgang Reisig

Recent interest in human-AI interactions in agent-based modeling and simulation (ABMS) has grown rapidly due to the widespread utilization of large language models (LLMs). ABMS is an intelligent approach that simulates autonomous agents'…

Human-Computer Interaction · Computer Science 2025-06-18 Ziyue Lin , Siqi Shen , Zichen Cheng , Cheok Lam Lai , Siming Chen

Self-replication is central to all life, and yet how it dynamically emerges in physical, non-equilibrium systems remains poorly understood. Von Neumann's pioneering work in the 1940s and subsequent developments suggest a natural hypothesis:…

Cellular Automata and Lattice Gases · Physics 2025-10-10 Jordan Cotler , Clément Hongler , Barbora Hudcová

The evolutionary balance between innate and learned behaviors is highly intricate, and different organisms have found different solutions to this problem. We hypothesize that the emergence and exact form of learning behaviors is naturally…

Neurons and Cognition · Quantitative Biology 2023-03-14 Emmanouil Giannakakis , Sina Khajehabdollahi , Anna Levina

Behavior is characterized by sequences of goal-oriented conducts, such as food uptake, socializing and resting. Classically, one would define for each task a corresponding satisfaction level, with the agent engaging, at a given time, in the…

Adaptation and Self-Organizing Systems · Physics 2019-06-28 Tim Koglin , Bulcsú Sándor , Claudius Gros

"Composable Life" is a hybrid project blending design fiction, experiential virtual reality, and scientific research. Through a multi-perspective, cross-media approach to speculative design, it reshapes our understanding of the digital…

Computers and Society · Computer Science 2025-08-29 Botao Amber Hu , Fangting

The classical "game of life" (GOL) due to Conway is a famous mathematical game constructed as a two-dimensional cellular automaton in which each cell is either alive or dead. A set of evolutionary rules determines whether a cell dies,…

Quantum Physics · Physics 2019-02-22 David Faux , Mayank Shah , Christopher Knapp

Cellular automata provide a fascinating class of dynamical systems capable of diverse complex behavior. These include simplified models for many phenomena seen in nature. Among other things, they provide insight into self-organized…

High Energy Physics - Lattice · Physics 2008-02-03 Michael Creutz

The pursuit of creating artificial intelligence (AI) mirrors our longstanding fascination with understanding our own intelligence. From the myths of Talos to Aristotelian logic and Heron's inventions, we have sought to replicate the marvels…

Neurons and Cognition · Quantitative Biology 2024-11-26 Nima Dehghani , Michael Levin

In nature, biological organisms jointly evolve both their morphology and their neurological capabilities to improve their chances for survival. Consequently, task information is encoded in both their brains and their bodies. In robotics,…

Robotics · Computer Science 2020-06-15 Ana Pervan , Todd D. Murphey

Large Language Models (LLMs) have taken the field of AI by storm, but their adoption in the field of Artificial Life (ALife) has been, so far, relatively reserved. In this work we investigate the potential synergies between LLMs and ALife,…

Large language models (LLMs) and vision-language models (VLMs) have the potential to transform biological research by enabling autonomous experimentation. Yet, their application remains constrained by rigid protocol design, limited…

Robotics · Computer Science 2025-07-03 Yibo Qiu , Zan Huang , Zhiyu Wang , Handi Liu , Yiling Qiao , Yifeng Hu , Shu'ang Sun , Hangke Peng , Ronald X Xu , Mingzhai Sun

In the present article we emphasize the importance of modeling time in the context of agent-based models. To this end, we present a (selective) survey of the Cellular Automata-literature on updating and draw parallels to the issue of agent…

Multiagent Systems · Computer Science 2010-08-06 Wolfgang Radax , Bernhard Rengs

We propose an approach of open-ended evolution via the simulation of swarm dynamics. In nature, swarms possess remarkable properties, which allow many organisms, from swarming bacteria to ants and flocking birds, to form higher-order…

Multiagent Systems · Computer Science 2019-03-21 Olaf Witkowski , Takashi Ikegami

Self-organization of heterogeneous particle swarms is rich in its dynamics but hard to design in a traditional top-down manner, especially when many types of kinetically distinct particles are involved. In this chapter, we discuss how we…

Neural and Evolutionary Computing · Computer Science 2017-05-29 Hiroki Sayama

We discuss the possibility of freedom of action in embodied systems that are, with no exception and at all scales of their body, subject to physical law. We relate the discussion to a model of an artificial agent that exhibits a primitive…

Adaptation and Self-Organizing Systems · Physics 2011-05-12 Hans J. Briegel

Commonly studied cellular automata are memoryless and have fixed topology of connections between cells. However by allowing updates of links and short-term memory in cells we may potentially discover novel complex regimes of spatio-temporal…

Cellular Automata and Lattice Gases · Physics 2012-12-13 Ramon Alonso-Sanz , Andrew Adamatzky