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The limits of molecular dynamics (MD) simulations of macromolecules are steadily pushed forward by the relentless developments of computer architectures and algorithms. This explosion in the number and extent (in size and time) of MD…

Many statistical learning models hold an assumption that the training data and the future unlabeled data are drawn from the same distribution. However, this assumption is difficult to fulfill in real-world scenarios and creates barriers in…

Human-Computer Interaction · Computer Science 2020-09-16 Yuxin Ma , Arlen Fan , Jingrui He , Arun Reddy Nelakurthi , Ross Maciejewski

Neural network based models are a very powerful tool for creating word embeddings, the objective of these models is to group similar words together. These embeddings have been used as features to improve results in various applications such…

Computation and Language · Computer Science 2016-11-27 Salman Mahmood , Rami Al-Rfou , Klaus Mueller

A computational graph in a deep neural network (DNN) denotes a specific data flow diagram (DFD) composed of many tensors and operators. Existing toolkits for visualizing computational graphs are not applicable when the structure is highly…

Human-Computer Interaction · Computer Science 2023-01-02 Rusheng Pan , Zhiyong Wang , Yating Wei , Han Gao , Gongchang Ou , Caleb Chen Cao , Jingli Xu , Tong Xu , Wei Chen

Deep learning is increasingly used in decision-making tasks. However, understanding how neural networks produce final predictions remains a fundamental challenge. Existing work on interpreting neural network predictions for images often…

Human-Computer Interaction · Computer Science 2019-09-04 Fred Hohman , Haekyu Park , Caleb Robinson , Duen Horng Chau

Attention based Large Language Models (LLMs) are the state-of-the-art in natural language processing (NLP). The two most common architectures are encoders such as BERT, and decoders like the GPT models. Despite the success of encoder…

Machine Learning · Computer Science 2024-03-29 Isaac Roberts , Alexander Schulz , Luca Hermes , Barbara Hammer

Autonomous driving in high-speed racing, as opposed to urban environments, presents significant challenges in scene understanding due to rapid changes in the track environment. Traditional sequential network approaches may struggle to meet…

Computer Vision and Pattern Recognition · Computer Science 2025-05-06 Suwesh Prasad Sah

Data visualization should be accessible for all analysts with data, not just the few with technical expertise. Visualization recommender systems aim to lower the barrier to exploring basic visualizations by automatically generating results…

Human-Computer Interaction · Computer Science 2018-08-16 Kevin Z. Hu , Michiel A. Bakker , Stephen Li , Tim Kraska , César A. Hidalgo

Virtual reality (VR) offers immersive visualization and intuitive interaction. We leverage VR to enable any biomedical professional to deploy a deep learning (DL) model for image classification. While DL models can be powerful tools for…

Machine Learning · Computer Science 2022-06-22 Kevin C. VanHorn , Meyer Zinn , Murat Can Cobanoglu

We present here a browser-based application for visualizing patterns of connectivity in 3D stacked data matrices with large numbers of pairwise relations. Visualizing a connectivity matrix, looking for trends and patterns, and dynamically…

Neurons and Cognition · Quantitative Biology 2018-01-04 David J. Caldwell , Jing Wu , Kaitlyn Casimo , Jeffrey G. Ojemann , Rajesh P. N. Rao

Although Deep Neural Networks have seen great success in recent years through various changes in overall architectures and optimization strategies, their fundamental underlying design remains largely unchanged. Computational neuroscience on…

Machine Learning · Computer Science 2019-12-17 Paul Bertens , Seong-Whan Lee

Recent advances in deep neuroevolution have demonstrated that evolutionary algorithms, such as evolution strategies (ES) and genetic algorithms (GA), can scale to train deep neural networks to solve difficult reinforcement learning (RL)…

Neural and Evolutionary Computing · Computer Science 2018-05-04 Rui Wang , Jeff Clune , Kenneth O. Stanley

Understanding neural responses to visual stimuli remains challenging due to the inherent complexity of brain representations and the modality gap between neural data and visual inputs. Existing methods, mainly based on reducing neural…

Computer Vision and Pattern Recognition · Computer Science 2026-01-06 Weihang You , Hanqi Jiang , Yi Pan , Junhao Chen , Tianming Liu , Fei Dou

Deep learning using multi-layer neural networks (NNs) architecture manifests superb power in modern machine learning systems. The trained Deep Neural Networks (DNNs) are typically large. The question we would like to address is whether it…

Computer Vision and Pattern Recognition · Computer Science 2016-07-05 Wei Pan , Hao Dong , Yike Guo

Many recent methods for unsupervised representation learning train models to be invariant to different "views," or distorted versions of an input. However, designing these views requires considerable trial and error by human experts,…

Machine Learning · Computer Science 2021-03-30 Alex Tamkin , Mike Wu , Noah Goodman

Cross-modal embeddings form the foundation for multi-modal models. However, visualization methods for interpreting cross-modal embeddings have been primarily confined to traditional dimensionality reduction (DR) techniques like PCA and…

Computer Vision and Pattern Recognition · Computer Science 2025-05-29 Yilin Ye , Junchao Huang , Xingchen Zeng , Jiazhi Xia , Wei Zeng

Harnessing the statistical power of neural networks to perform language understanding and symbolic reasoning is difficult, when it requires executing efficient discrete operations against a large knowledge-base. In this work, we introduce a…

Computation and Language · Computer Science 2017-04-25 Chen Liang , Jonathan Berant , Quoc Le , Kenneth D. Forbus , Ni Lao

BrainPainter is a software for the 3D visualization of human brain structures; it generates colored brain images using user-defined biomarker data for each brain region. However, BrainPainter is only able to generate human brain images. In…

Graphics · Computer Science 2021-03-30 Vedvayas Mallela , Polina Golland , Razvan V. Marinescu

Neural machine translation has achieved remarkable empirical performance over standard benchmark datasets, yet recent evidence suggests that the models can still fail easily dealing with substandard inputs such as misspelled words, To…

Computation and Language · Computer Science 2020-10-21 Haohan Wang , Peiyan Zhang , Eric P. Xing
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