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Spatial organization is a core challenge for all large agent-based models with local interactions. In biological tissue models, spatial search and reinsertion are frequently reported as the most expensive steps of the simulation. One of the…

Computational Geometry · Computer Science 2016-11-11 Ilya Dmitrenok , Viktor Drobnyy , Leonard Johard , Manuel Mazzara

Certain classes of problems, including perceptual data understanding, robotics, discovery, and learning, can be represented as incremental, dynamically constructed belief networks. These automatically constructed networks can be dynamically…

Artificial Intelligence · Computer Science 2013-02-28 Keung-Chi Ng , Tod S. Levitt

Computational topology has recently known an important development toward data analysis, giving birth to the field of topological data analysis. Topological persistence, or persistent homology, appears as a fundamental tool in this field.…

Statistics Theory · Mathematics 2013-05-28 Frédéric Chazal , Marc Glisse , Catherine Labruère , Bertrand Michel

Communication networks form the backbone of our society. Topology control algorithms optimize the topology of such communication networks. Due to the importance of communication networks, a topology control algorithm should guarantee…

Software Engineering · Computer Science 2018-05-10 Roland Kluge , Michael Stein , Gergely Varró , Andy Schürr , Matthias Hollick , Max Mühlhäuser

Behavior Trees are a task switching policy representation that can grant reactiveness and fault tolerance. Moreover, because of their structure and modularity, a variety of methods can be used to generate them automatically. In this short…

Robotics · Computer Science 2023-01-18 Matteo Iovino , Christian Smith

Complex networks describe a wide range of systems in nature and society, much quoted examples including the cell, a network of chemicals linked by chemical reactions, or the Internet, a network of routers and computers connected by physical…

Statistical Mechanics · Physics 2016-08-31 Reka Albert , Albert-Laszlo Barabasi

In this survey, we explore recent literature on finding the cores of higher graphs using geometric and topological means. We study graphs, hypergraphs, and simplicial complexes, all of which are models of higher graphs. We study the notion…

History and Overview · Mathematics 2025-06-30 Inés García-Redondo , Claudia Landi , Sarah Percival , Anda Skeja , Bei Wang , Ling Zhou

Graphs are important data representations for describing objects and their relationships, which appear in a wide diversity of real-world scenarios. As one of a critical problem in this area, graph generation considers learning the…

Machine Learning · Computer Science 2022-10-06 Xiaojie Guo , Liang Zhao

Some top-down problem specifications, if executed directly, may compute sub-problems repeatedly. Instead, we may want a bottom-up algorithm that stores solutions of sub-problems in a table to be reused. It can be tricky, however, to figure…

Programming Languages · Computer Science 2024-03-05 Shin-Cheng Mu

In this paper we study the Steiner tree problem over a dynamic set of terminals. We consider the model where we are given an $n$-vertex graph $G=(V,E,w)$ with positive real edge weights, and our goal is to maintain a tree which is a good…

Data Structures and Algorithms · Computer Science 2016-06-27 Jakub Łącki , Jakub Oćwieja , Marcin Pilipczuk , Piotr Sankowski , Anna Zych

This work seeks to tackle the inherent complexity of dataspaces by introducing a novel data structure that can represent datasets across multiple levels of abstraction, ranging from local to global. We propose the concept of a multilevel…

Data Structures and Algorithms · Computer Science 2025-04-01 Marco Caputo , Michele Russo , Emanuela Merelli

The richness of many complex systems stems from the interactions among their components. The higher-order nature of these interactions, involving many units at once, and their temporal dynamics constitute crucial properties that shape the…

Physics and Society · Physics 2024-07-29 Marco Mancastroppa , Iacopo Iacopini , Giovanni Petri , Alain Barrat

An algorithm on weighted graphs is called universally optimal if it is optimal for every input graph, in the worst case taken over all weight assignments. Informally, this means the algorithm is competitive even with algorithms that are…

Data Structures and Algorithms · Computer Science 2026-02-19 Benjamin Aram Berendsohn

Natural and man-made transport webs are frequently dominated by dense sets of nested cycles. The architecture of these networks, as defined by the topology and edge weights, determines how efficiently the networks perform their function.…

Quantitative Methods · Quantitative Biology 2016-07-27 Carl D. Modes , Marcelo O. Magnasco , Eleni Katifori

Spatial networks are ubiquitous in social, geographical, physical, and biological applications. To understand the large-scale structure of networks, it is important to develop methods that allow one to directly probe the effects of space on…

Social and Information Networks · Computer Science 2020-09-23 Michelle Feng , Mason A. Porter

The theory of sparse structures usually uses tree like structures as building blocks. In the context of sparse/dense dichotomy this role is played by graphs with bounded tree depth. In this paper we survey results related to this concept…

Combinatorics · Mathematics 2016-08-09 Jaroslav Nesetril , Patrice Ossona De Mendez

We propose a novel method for topological analysis of unweighted graphs which is based on \textit{persistent homology}. The proposed method maps the input graph to a complete weighted graph where the weighting function maps each edge to a…

Algebraic Topology · Mathematics 2020-07-31 Padraig Corcoran

Treewidth is a graph parameter of fundamental importance to algorithmic and structural graph theory. This paper surveys several graph parameters tied to treewidth, including separation number, tangle number, well-linked number and Cartesian…

Combinatorics · Mathematics 2016-01-29 Daniel J. Harvey , David R. Wood

SPQR-trees are a central component of graph drawing and are also important in many further areas of computer science. From their inception onwards, they have always had a strong relation to dynamic algorithms maintaining information, e.g.,…

Data Structures and Algorithms · Computer Science 2023-01-11 Simon D. Fink , Ignaz Rutter

The construction of cut trees (also known as Gomory-Hu trees) for a given graph enables the minimum-cut size of the original graph to be obtained for any pair of vertices. Cut trees are a powerful back-end for graph management and mining,…

Data Structures and Algorithms · Computer Science 2016-09-29 Takuya Akiba , Yoichi Iwata , Yosuke Sameshima , Naoto Mizuno , Yosuke Yano
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