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Over the past few years, there has been a considerable spread of microarray technology in many biological patterns, particularly in those pertaining to cancer diseases like leukemia, prostate, colon cancer, etc. The primary bottleneck that…

Quantitative Methods · Quantitative Biology 2020-07-20 Parth Patel , Kalpdrum Passi , Chakresh Kumar Jain

Matrix factorization is a common machine learning technique for recommender systems. Despite its high prediction accuracy, the Bayesian Probabilistic Matrix Factorization algorithm (BPMF) has not been widely used on large scale data because…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-05-12 Tom Vander Aa , Imen Chakroun , Tom Haber

Nonnegative matrix factorization (NMF) is a powerful technique for dimension reduction, extracting latent factors and learning part-based representation. For large datasets, NMF performance depends on some major issues: fast algorithms,…

Optimization and Control · Mathematics 2015-07-01 Duy-Khuong Nguyen , Tu-Bao Ho

Identifying recurring patterns in high-dimensional time series data is an important problem in many scientific domains. A popular model to achieve this is convolutive nonnegative matrix factorization (CNMF), which extends classic…

Machine Learning · Computer Science 2019-07-02 Anthony Degleris , Ben Antin , Surya Ganguli , Alex H Williams

Matrix factorization is a very common machine learning technique in recommender systems. Bayesian Matrix Factorization (BMF) algorithms would be attractive because of their ability to quantify uncertainty in their predictions and avoid…

Machine Learning · Computer Science 2020-04-15 Tom Vander Aa , Xiangju Qin , Paul Blomstedt , Roel Wuyts , Wilfried Verachtert , Samuel Kaski

Lee and Seung (2000) introduced numerical solutions for non-negative matrix factorization (NMF) using iterative multiplicative update algorithms. These algorithms have been actively utilized as dimensionality reduction tools for…

Numerical Analysis · Mathematics 2025-01-23 Sungjae Cho

In this paper, we design a hierarchical clustering algorithm for high-resolution hyperspectral images. At the core of the algorithm, a new rank-two nonnegative matrix factorizations (NMF) algorithm is used to split the clusters, which is…

Computer Vision and Pattern Recognition · Computer Science 2015-02-18 Nicolas Gillis , Da Kuang , Haesun Park

Nonnegative matrix factorization (NMF) is a data analysis technique used in a great variety of applications such as text mining, image processing, hyperspectral data analysis, computational biology, and clustering. In this paper, we…

Optimization and Control · Mathematics 2012-08-13 Nicolas Gillis , François Glineur

Nonnegative matrix factorization (NMF) has been widely used to learn low-dimensional representations of data. However, NMF pays the same attention to all attributes of a data point, which inevitably leads to inaccurate representation. For…

Machine Learning · Computer Science 2021-11-30 Jiao Wei , Can Tong , Bingxue Wu , Qiang He , Shouliang Qi , Yudong Yao , Yueyang Teng

Semi-Non-negative Matrix Factorization is a technique that learns a low-dimensional representation of a dataset that lends itself to a clustering interpretation. It is possible that the mapping between this new representation and our…

Computer Vision and Pattern Recognition · Computer Science 2015-09-11 George Trigeorgis , Konstantinos Bousmalis , Stefanos Zafeiriou , Bjoern W. Schuller

We propose a geometric assumption on nonnegative data matrices such that under this assumption, we are able to provide upper bounds (both deterministic and probabilistic) on the relative error of nonnegative matrix factorization (NMF). The…

Machine Learning · Statistics 2017-08-02 Zhaoqiang Liu , Vincent Y. F. Tan

Non-negative matrix factorization (NMF) and non-negative tensor factorization (NTF) decompose non-negative high-dimensional data into non-negative low-rank components. NMF and NTF methods are popular for their intrinsic interpretability and…

Machine Learning · Computer Science 2024-12-02 Alexander Sietsema , Zerrin Vural , James Chapman , Yotam Yaniv , Deanna Needell

Biclustering is an effective technique in data mining and pattern recognition. Biclustering algorithms based on traditional clustering face two fundamental limitations when processing high-dimensional data: (1) The distance concentration…

Machine Learning · Computer Science 2025-05-01 Yan Huang , Da-Qing Zhang

We introduce a probabilistic model with implicit norm regularization for learning nonnegative matrix factorization (NMF) that is commonly used for predicting missing values and finding hidden patterns in the data, in which the matrix…

Machine Learning · Computer Science 2022-08-23 Jun Lu , Christine P. Chai

Non-negative Matrix Factorization (NMF) methods offer an appealing unsupervised learning method for real-time analysis of streaming spectral data in time-sensitive data collection, such as $\textit{in situ}$ characterization of materials.…

Applied Physics · Physics 2024-06-12 Phillip M. Maffettone , Aidan C. Daly , Daniel Olds

Matrix factorization (MF) is a versatile learning method that has found wide applications in various data-driven disciplines. Still, many MF algorithms do not adequately scale with the size of available datasets and/or lack…

Machine Learning · Computer Science 2019-05-30 Abhishek Agarwal , Jianhao Peng , Olgica Milenkovic

This paper presents an adaptive randomized algorithm for computing the butterfly factorization of a $m\times n$ matrix with $m\approx n$ provided that both the matrix and its transpose can be rapidly applied to arbitrary vectors. The…

Numerical Analysis · Mathematics 2020-02-11 Yang Liu , Xin Xing , Han Guo , Eric Michielssen , Pieter Ghysels , Xiaoye Sherry Li

Non-negative Matrix Factorization (NMF) asks to decompose a (entry-wise) non-negative matrix into the product of two smaller-sized nonnegative matrices, which has been shown intractable in general. In order to overcome this issue, the…

Data Structures and Algorithms · Computer Science 2019-07-15 Zhihuai Chen , Yinan Li , Xiaoming Sun , Pei Yuan , Jialin Zhang

Low rank representation of binary matrix is powerful in disentangling sparse individual-attribute associations, and has received wide applications. Existing binary matrix factorization (BMF) or co-clustering (CC) methods often assume i.i.d…

Machine Learning · Computer Science 2020-08-11 Changlin Wan , Wennan Chang , Tong Zhao , Sha Cao , Chi Zhang

In the Nonnegative Matrix Factorization (NMF) problem we are given an $n \times m$ nonnegative matrix $M$ and an integer $r > 0$. Our goal is to express $M$ as $A W$ where $A$ and $W$ are nonnegative matrices of size $n \times r$ and $r…

Data Structures and Algorithms · Computer Science 2011-11-04 Sanjeev Arora , Rong Ge , Ravi Kannan , Ankur Moitra
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