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With the increasing affordability and accessibility of genome sequencing data, de novo genome assembly is an important first step to a wide variety of downstream studies and analyses. Therefore, bioinformatics tools that enable the…

Genomics · Quantitative Biology 2023-06-09 Lauren Coombe , René L. Warren , Johnathan Wong , Vladimir Nikolic , Inanc Birol

Graph neural networks (GNNs) have achieved superior performance on node classification tasks in the last few years. Commonly, this is framed in a transductive semi-supervised learning setup wherein the entire graph, including the target…

Machine Learning · Computer Science 2021-10-11 Artun Bayer , Arindam Chowdhury , Santiago Segarra

Due to the pervasive diffusion of personal mobile and IoT devices, many ``smart environments'' (e.g., smart cities and smart factories) will be, among others, generators of huge amounts of data. Currently, this is typically achieved through…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-09-28 Lorenzo Valerio , Andrea Passarella , Marco Conti

Deploying TinyML models on low-cost IoT hardware is very challenging, due to limited device memory capacity. Neural processing unit (NPU) hardware address the memory challenge by using model compression to exploit weight quantization and…

Machine Learning · Computer Science 2023-01-06 Igor Fedorov , Ramon Matas , Hokchhay Tann , Chuteng Zhou , Matthew Mattina , Paul Whatmough

Tabular datasets play a crucial role in various applications. Thus, developing efficient, effective, and widely compatible prediction algorithms for tabular data is important. Currently, two prominent model types, Gradient Boosted Decision…

Machine Learning · Computer Science 2024-07-16 Jiahuan Yan , Jintai Chen , Qianxing Wang , Danny Z. Chen , Jian Wu

The recent ground-breaking advances in deep learning networks ( DNNs ) make them attractive for embedded systems. However, it can take a long time for DNNs to make an inference on resource-limited embedded devices. Offloading the…

Performance · Computer Science 2018-05-14 Ben Taylor , Vicent Sanz Marco , Willy Wolff , Yehia Elkhatib , Zheng Wang

Deep Neural Network (DNN) frameworks use distributed training to enable faster time to convergence and alleviate memory capacity limitations when training large models and/or using high dimension inputs. With the steady increase in datasets…

Distributed, Parallel, and Cluster Computing · Computer Science 2021-04-20 Albert Njoroge Kahira , Truong Thao Nguyen , Leonardo Bautista Gomez , Ryousei Takano , Rosa M Badia , Mohamed Wahib

We live in a period where bio-informatics is rapidly expanding, a significant quantity of genomic data has been produced as a result of the advancement of high-throughput genome sequencing technology, raising concerns about the costs…

Quantitative Methods · Quantitative Biology 2023-03-10 Mehedi Hasan Sarkar , Adnan Ferdous Ashrafi

In fault-tolerant quantum computing, a large number of physical qubits are required to construct a single logical qubit, and a single quantum node may be able to hold only a small number of logical qubits. In such a case, the idea of…

Quantum Physics · Physics 2026-01-15 Soshun Naito , Yasunari Suzuki , Yuuki Tokunaga

Deep learning methods have shown great promise in many practical applications, ranging from speech recognition, visual object recognition, to text processing. However, most of the current deep learning methods suffer from scalability…

Machine Learning · Statistics 2015-08-31 Yanping Huang , Sai Zhang

Deep neural network (DNN) architectures have been shown to outperform traditional pipelines for object segmentation and pose estimation using RGBD data, but the performance of these DNN pipelines is directly tied to how representative the…

Computer Vision and Pattern Recognition · Computer Science 2017-09-27 Pat Marion , Peter R. Florence , Lucas Manuelli , Russ Tedrake

Almost in every heavily computation-dependent application, from 6G communication systems to autonomous driving platforms, a large portion of computing should be near to the client side. Edge computing (AI at Edge) in mobile devices is one…

Hardware Architecture · Computer Science 2024-07-29 Seyed Nima Omidsajedi , Rekha Reddy , Jianming Yi , Jan Herbst , Christoph Lipps , Hans Dieter Schotten

Human genomic data carry unique information about an individual and offer unprecedented opportunities for healthcare. The clinical interpretations derived from large genomic datasets can greatly improve healthcare and pave the way for…

Cryptography and Security · Computer Science 2022-09-19 Mohammed Alghazwi , Fatih Turkmen , Joeri van der Velde , Dimka Karastoyanova

Computational Grids are emerging as a popular paradigm for solving large-scale compute and data intensive problems in science, engineering, and commerce. However, application composition, resource management and scheduling in these…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Rajkumar Buyya , Kim Branson , Jon Giddy , David Abramson

Deoxyribonucleic acid (DNA) has shown great promise in enabling computational applications, most notably in the fields of DNA digital data storage and DNA computing. Information is encoded as DNA strands, which will naturally bind in…

Machine Learning · Computer Science 2021-10-22 David Buterez

The research community has considered in the past the application of Artificial Intelligence (AI) techniques to control and operate networks. A notable example is the Knowledge Plane proposed by D.Clark et al. However, such techniques have…

Software Defined Networking (SDN) promises greater flexibility for directing packet flows, and Network Function Virtualization promises to enable dynamic management of software-based network functions. However, the current divide between an…

Networking and Internet Architecture · Computer Science 2016-06-09 Wei Zhang , Guyue Liu , Timothy Wood , K. K. Ramakrishnan , Jinho Hwang

In an ever expanding set of research and application areas, deep neural networks (DNNs) set the bar for algorithm performance. However, depending upon additional constraints such as processing power and execution time limits, or…

Machine Learning · Computer Science 2021-06-22 Nathan Dahlin , Krishna Chaitanya Kalagarla , Nikhil Naik , Rahul Jain , Pierluigi Nuzzo

NDN has gained significant attention due to the appearance of several unforeseen design flaws that became evident with new communication scenarios. Among its many features, the two standard NDN forwarding strategies are not adaptive,…

Networking and Internet Architecture · Computer Science 2020-10-21 Ygor Amaral B. L. de Sena , Kelvin Lopes Dias , Cleber Zanchettin

Deep neural network (DNN) partition is a research problem that involves splitting a DNN into multiple parts and offloading them to specific locations. Because of the recent advancement in multi-access edge computing and edge intelligence,…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-04-21 Di Xu , Xiang He , Tonghua Su , Zhongjie Wang