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Data exploration is an important step of every data science and machine learning project, including those involving textual data. We provide a novel language tool, in the form of a publicly available Python library for extracting patterns…

Computation and Language · Computer Science 2022-06-20 Piyawat Lertvittayakumjorn , Leshem Choshen , Eyal Shnarch , Francesca Toni

The Libra Toolkit is a collection of algorithms for learning and inference with discrete probabilistic models, including Bayesian networks, Markov networks, dependency networks, and sum-product networks. Compared to other toolkits, Libra…

Machine Learning · Computer Science 2015-04-02 Daniel Lowd , Amirmohammad Rooshenas

Nuclear reactors are one of the most intense, pure, controllable, cost-effective, and well-understood sources of neutrinos. Reactors have played a major role in the study of neutrino oscillations, a phenomenon that indicates that neutrinos…

High Energy Physics - Experiment · Physics 2015-04-30 Petr Vogel , Liangjian Wen , Chao Zhang

A python library for the creation of MCNP6 input decks is described. The library supports geometry generation with automatic assignment of surface/facet numbers, cell numbers, transform numbers and material numbers along with MCNP Universes…

Computational Physics · Physics 2025-02-25 Nikhil Deshmukh , Mital Zalavadia

Reservoir Computing Networks (RCNs) belong to a group of machine learning techniques that project the input space non-linearly into a high-dimensional feature space, where the underlying task can be solved linearly. Popular variants of RCNs…

Machine Learning · Computer Science 2022-05-31 Peter Steiner , Azarakhsh Jalalvand , Simon Stone , Peter Birkholz

Formal methods have enabled breakthroughs in many fields, such as in hardware verification, machine learning and biological systems. The key object of interest in systems biology, synthetic biology, and molecular programming is chemical…

Emerging Technologies · Computer Science 2020-08-11 Marko Vasic , David Soloveichik , Sarfraz Khurshid

Astrophysical explosions such as supernovae are fascinating events that require sophisticated algorithms and substantial computational power to model. Castro and MAESTROeX are nuclear astrophysics codes that simulate thermonuclear fusion in…

Instrumentation and Methods for Astrophysics · Physics 2020-07-13 Max P. Katz , Ann Almgren , Maria Barrios Sazo , Kiran Eiden , Kevin Gott , Alice Harpole , Jean M. Sexton , Don E. Willcox , Weiqun Zhang , Michael Zingale

The Python ecosystem represents a global, data rich, technology-enabled network. By analyzing Python's dependency network, its top 14 most imported libraries and cPython (or core Python) libraries, this research finds clear evidence the…

Social and Information Networks · Computer Science 2022-01-19 Thomas Pike , Robert Colter , Mark Bailey , Jackie Kazil , John Speed Meyers

A promising astrophysical site to produce the lighter heavy elements of the first $r$-process peak ($Z = 38-47$) is the moderately neutron rich ($0.4 < Y_e < 0.5$) neutrino-driven ejecta of explosive environments, such as core-collapse…

High Energy Astrophysical Phenomena · Physics 2022-08-17 A. Psaltis , A. Arcones , F. Montes , P. Mohr , C. J. Hansen , M. Jacobi , H. Schatz

The literature on structured prediction for NLP describes a rich collection of distributions and algorithms over sequences, segmentations, alignments, and trees; however, these algorithms are difficult to utilize in deep learning…

Computation and Language · Computer Science 2020-02-04 Alexander M. Rush

We present the TRIQS library, a Toolbox for Research on Interacting Quantum Systems. It is an open-source, computational physics library providing a framework for the quick development of applications in the field of many-body quantum…

Strongly Correlated Electrons · Physics 2016-09-12 Olivier Parcollet , Michel Ferrero , Thomas Ayral , Hartmut Hafermann , Igor Krivenko , Laura Messio , Priyanka Seth

Latte (for LATent Tensor Evaluation) is a Python library for evaluation of latent-based generative models in the fields of disentanglement learning and controllable generation. Latte is compatible with both PyTorch and TensorFlow/Keras, and…

Machine Learning · Computer Science 2022-03-24 Karn N. Watcharasupat , Junyoung Lee , Alexander Lerch

NIMFA is an open-source Python library that provides a unified interface to nonnegative matrix factorization algorithms. It includes implementations of state-of-the-art factorization methods, initialization approaches, and quality scoring.…

Machine Learning · Computer Science 2018-08-07 Marinka Zitnik , Blaz Zupan

Organizations have realized the importance of data analysis and its benefits. This in combination with Machine Learning algorithms has allowed to solve problems more easily, making these processes less time-consuming. Neural networks are…

Neural and Evolutionary Computing · Computer Science 2022-04-19 Alvaro J. Garcia-Tejedor , Alberto Nogales

We present Fortuna, an open-source library for uncertainty quantification in deep learning. Fortuna supports a range of calibration techniques, such as conformal prediction that can be applied to any trained neural network to generate…

Neural network interatomic potentials (NNPs) have recently proven to be powerful tools to accurately model complex molecular systems while bypassing the high numerical cost of ab-initio molecular dynamics simulations. In recent years,…

Chemical Physics · Physics 2024-07-29 Thomas Plé , Olivier Adjoua , Louis Lagardère , Jean-Philip Piquemal

Recent multi-messenger detection of the binary neutron star merger (GW170817) energized the astrophysical community and encouraged further research for determination of nuclear physics observables. Comprehensive studies of atomic nuclei in…

Solar and Stellar Astrophysics · Physics 2021-05-03 Boris Pritychenko

Computer vision techniques have immense potential for materials design applications. In this work, we introduce an integrated and general-purpose AtomVision library that can be used to generate, curate scanning tunneling microscopy (STM)…

Materials Science · Physics 2023-03-06 Kamal Choudhary , Ramya Gurunathan , Brian DeCost , Adam Biacchi

Wavelength calibration is a routine and critical part of any spectral work-flow, but many astronomers still resort to matching detected peaks and emission lines by hand. We present RASCAL (RANSAC Assisted Spectral CALibration), a python…

Instrumentation and Methods for Astrophysics · Physics 2019-12-13 Josh Veitch-Michaelis , Marco C Lam

The nuclear physics input used to compute the Monte Carlo reaction rates and probability density functions that are tabulated in the second paper of this series (Paper II) is presented. Specifically, we publish the input files to the Monte…

Solar and Stellar Astrophysics · Physics 2015-05-18 Christian Iliadis , Richard Longland , Art Champagne , Alain Coc
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