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Attention mechanisms are critical to the success of large language models (LLMs), driving significant advancements in multiple fields. However, for graph-structured data, which requires emphasis on topological connections, they fall short…

Artificial Intelligence · Computer Science 2025-05-06 Zhong Guan , Likang Wu , Hongke Zhao , Ming He , Jianpin Fan

Graph Neural Networks (GNNs) have emerged as powerful tools for learning on graph-structured data, but often struggle to balance local and global information. While graph Transformers aim to address this by enabling long-range interactions,…

Machine Learning · Computer Science 2025-11-18 Jeongwhan Choi , Seungjun Park , Sumin Park , Sung-Bae Cho , Noseong Park

Learning on text-attributed graphs has motivated the use of Large Language Models (LLMs) for graph learning. However, most fusion strategies are applied uniformly across all nodes and attain only small overall performance gains. We argue…

Machine Learning · Computer Science 2025-10-14 Donald Loveland , Yao-An Yang , Danai Koutra

Supervised models of NLP rely on large collections of text which closely resemble the intended testing setting. Unfortunately matching text is often not available in sufficient quantity, and moreover, within any domain of text, data is…

Computation and Language · Computer Science 2019-06-10 Yitong Li , Timothy Baldwin , Trevor Cohn

Graph Neural Networks (GNNs) have shown promising potential in graph representation learning. The majority of GNNs define a local message-passing mechanism, propagating information over the graph by stacking multiple layers. These methods,…

Machine Learning · Computer Science 2024-02-20 Ali Behrouz , Farnoosh Hashemi

The quest for efficient and robust deep learning models for molecular systems representation is increasingly critical in scientific exploration. The advent of message passing neural networks has marked a transformative era in graph-based…

Computational Physics · Physics 2026-01-05 Jian Chang , Shuze Zhu

Benefiting from the injection of human prior knowledge, graphs, as derived discrete data, are semantically dense so that models can efficiently learn the semantic information from such data. Accordingly, graph neural networks (GNNs) indeed…

Machine Learning · Computer Science 2023-05-25 Hang Gao , Jiangmeng Li , Wenwen Qiang , Lingyu Si , Xingzhe Su , Fengge Wu , Changwen Zheng , Fuchun Sun

Graph Neural Network (GNN), with the main idea of encoding graph structure information of graphs by propagation and aggregation, has developed rapidly. It achieved excellent performance in representation learning of multiple types of graphs…

Machine Learning · Computer Science 2024-07-04 Yushan Zhu , Wen Zhang , Yajing Xu , Zhen Yao , Mingyang Chen , Huajun Chen

Existing knowledge distillation methods on graph neural networks (GNNs) are almost offline, where the student model extracts knowledge from a powerful teacher model to improve its performance. However, a pre-trained teacher model is not…

Machine Learning · Computer Science 2022-05-06 Jiongyu Guo , Defang Chen , Can Wang

The task of building semantics for structured data such as CSV, JSON, and XML files is highly relevant in the knowledge representation field. Even though we have a vast of structured data on the internet, mapping them to domain ontologies…

Computation and Language · Computer Science 2025-01-16 Ning Pei Ding , Jingge Du , Zaiwen Feng

Link prediction on graphs has applications spanning from recommender systems to drug discovery. Temporal link prediction (TLP) refers to predicting future links in a temporally evolving graph and adds additional complexity related to the…

Machine Learning · Computer Science 2025-04-18 Ayan Chatterjee , Barbara Ikica , Babak Ravandi , John Palowitch

\textit{Graph neural networks} (GNNs) are effective models for many dynamical systems consisting of entities and relations. Although most GNN applications assume a single type of entity and relation, many situations involve multiple types…

Machine Learning · Computer Science 2023-10-12 Ferran Alet , Erica Weng , Tomás Lozano Pérez , Leslie Pack Kaelbling

Graph Neural Networks (GNNs) have achieved great success among various domains. Nevertheless, most GNN methods are sensitive to the quality of graph structures. To tackle this problem, some studies exploit different graph structure learning…

Machine Learning · Computer Science 2021-08-11 Liping Wang , Fenyu Hu , Shu Wu , Liang Wang

The integration of Large Language Models (LLMs) with Graph Neural Networks (GNNs) has recently been explored to enhance the capabilities of Text Attribute Graphs (TAGs). Most existing methods feed textual descriptions of the graph structure…

Computation and Language · Computer Science 2025-04-03 Zhaoxing Li , Xiaoming Zhang , Haifeng Zhang , Chengxiang Liu

Our interest is in scientific problems with the following characteristics: (1) Data are naturally represented as graphs; (2) The amount of data available is typically small; and (3) There is significant domain-knowledge, usually expressed…

Machine Learning · Computer Science 2021-08-17 Tirtharaj Dash , Ashwin Srinivasan , Lovekesh Vig

Large language models (LLMs) are gaining increasing attention for their capability to process graphs with rich text attributes, especially in a zero-shot fashion. Recent studies demonstrate that LLMs obtain decent text classification…

Machine Learning · Computer Science 2024-06-18 Jin Huang , Xingjian Zhang , Qiaozhu Mei , Jiaqi Ma

Unified graph representation learning aims to generate node embeddings, which can be applied to multiple downstream applications of graph analytics. However, existing studies based on graph neural networks and language models either suffer…

Computation and Language · Computer Science 2025-08-05 Wenbo Shang , Xuliang Zhu , Xin Huang

In Natural Language Processing (NLP), Machine Reading Comprehension (MRC) is the task of answering a question based on a given context. To handle questions in the medical domain, modern language models such as BioBERT, SciBERT and even…

Computation and Language · Computer Science 2024-12-16 Saptarshi Sengupta , Connor Heaton , Suhan Cui , Soumalya Sarkar , Prasenjit Mitra

Graph neural networks (GNNs) have emerged as a powerful model to capture critical graph patterns. Instead of treating them as black boxes in an end-to-end fashion, attempts are arising to explain the model behavior. Existing works mainly…

Machine Learning · Computer Science 2024-02-22 Yi Nian , Yurui Chang , Wei Jin , Lu Lin

This paper designs and implements an explainable recommendation model that integrates knowledge graphs with structure-aware attention mechanisms. The model is built on graph neural networks and incorporates a multi-hop neighbor aggregation…

Information Retrieval · Computer Science 2025-10-14 Shuangquan Lyu , Ming Wang , Huajun Zhang , Jiasen Zheng , Junjiang Lin , Xiaoxuan Sun
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