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The basic principle of graph rewriting is the stepwise replacement of subgraphs inside a host graph. A challenge in such replacement steps is the treatment of the patch graph, consisting of those edges of the host graph that touch the…

Logic in Computer Science · Computer Science 2020-08-20 Roy Overbeek , Jörg Endrullis

We develop a theory of rewriting for structured cospans in order to extend compositional methods for modeling open networks. First, we introduce a category whose objects are structured cospans, and establish conditions under which it is…

Category Theory · Mathematics 2026-04-06 Daniel Cicala

In this paper, we propose a new type of graph, denoted as "embedded-graph", and its theory, which employs a distributed representation to describe the relations on the graph edges. Embedded-graphs can express linguistic and complicated…

Discrete Mathematics · Computer Science 2017-09-15 Atsushi Yokoyama

Equality saturation, a technique for program optimisation and reasoning, has gained attention due to the resurgence of equality graphs (e-graphs). E-graphs represent equivalence classes of terms under rewrite rules, enabling simultaneous…

Logic in Computer Science · Computer Science 2025-05-05 Aleksei Tiurin , Dan R. Ghica , Nick Hu

String diagrams are a powerful tool for reasoning about physical processes, logic circuits, tensor networks, and many other compositional structures. The distinguishing feature of these diagrams is that edges need not be connected to…

Category Theory · Mathematics 2010-11-19 Lucas Dixon , Aleks Kissinger

We tackle the problem of attributed graph transformations and propose a new algorithmic approach for defining parallel graph transformations allowing overlaps. We start by introducing some abstract operations over graph structures. Then, we…

Logic in Computer Science · Computer Science 2018-08-10 Thierry Boy de la Tour , Rachid Echahed

In this paper, we analyze embeddings of grid graphs on orientable surfaces. We determine the genus of a large class of k-dimensional grid graphs and effective two-sided bounds for the genus of any 3-dimensional grid graph, both in terms of…

Combinatorics · Mathematics 2022-04-20 Christian Millichap , Fabian Salinas

In this paper we adapt previous work on rewriting string diagrams using hypergraphs to the case where the underlying category has a traced comonoid structure, in which wires can be forked and the outputs of a morphism can be connected to…

Logic in Computer Science · Computer Science 2026-01-14 Dan R. Ghica , George Kaye

Given graphs as input, Graph Neural Networks (GNNs) support the inference of nodes, edges, attributes, or graph properties. Graph Rewriting investigates the rule-based manipulation of graphs to model complex graph transformations. We…

Machine Learning · Computer Science 2023-05-31 Adam Machowczyk , Reiko Heckel

Graph embedding is a transformation of nodes of a network into a set of vectors. A good embedding should capture the underlying graph topology and structure, node-to-node relationship, and other relevant information about the graph, its…

Social and Information Networks · Computer Science 2021-12-02 Bogumił Kamiński , Łukasz Kraiński , Paweł Prałat , François Théberge

This work studies certain aspects of graphs embedded on surfaces. Initially, a colored graph model for a map of a graph on a surface is developed. Then, a concept analogous to (and extending) planar graph is introduced in the same spirit as…

Combinatorics · Mathematics 2007-05-23 Sostenes Lins

We present a new and powerful algebraic framework for graph rewriting, based on drags, a class of graphs enjoying a novel composition operator. Graphs are embellished with roots and sprouts, which can be wired together to form edges. Drags…

Logic in Computer Science · Computer Science 2024-06-28 Nachum Dershowitz , Jean-Pierre Jouannaud , Fernando Orejas

Graph embeddings have become a key and widely used technique within the field of graph mining, proving to be successful across a broad range of domains including social, citation, transportation and biological. Graph embedding techniques…

Machine Learning · Computer Science 2018-06-21 Stephen Bonner , Ibad Kureshi , John Brennan , Georgios Theodoropoulos , Andrew Stephen McGough , Boguslaw Obara

Computational topology is an area that revisits topological problems from an algorithmic point of view, and develops topological tools for improved algorithms. We survey results in computational topology that are concerned with graphs drawn…

Computational Geometry · Computer Science 2017-09-06 Éric Colin de Verdière

We demonstrate how category theory provides specifications that can efficiently be implemented via imperative algorithms and apply this to the field of graph rewriting. By examples, we show how this paradigm of software development makes it…

Logic in Computer Science · Computer Science 2023-04-03 Kristopher Brown , Evan Patterson , Tyler Hanks , James Fairbanks

Knowledge graph embedding involves learning representations of entities -- the vertices of the graph -- and relations -- the edges of the graph -- such that the resulting representations encode the known factual information represented by…

Machine Learning · Computer Science 2023-03-21 Thomas Gebhart , Jakob Hansen , Paul Schrater

We tackle the problem of simultaneous transformations of networks represented as graphs. Roughly speaking, one may distinguish two kinds of simultaneous or parallel rewrite relations over complex structures such as graphs: (i) those which…

Formal Languages and Automata Theory · Computer Science 2017-01-25 Rachid Echahed , Aude Maignan

We demonstrate that graphs embedded on surfaces are a powerful and practical tool to generate, characterize and simulate networks with a broad range of properties. Remarkably, the study of topologically embedded graphs is non-restrictive…

Other Condensed Matter · Physics 2015-03-19 Tomaso Aste , Ruggero Gramatica , T. Di Matteo

It is known that graphs cellularly embedded into surfaces are equivalent to ribbon graphs. In this work, we generalize this statement to broader classes of graphs and surfaces. Half-edge graphs extend abstract graphs and are useful in…

Combinatorics · Mathematics 2017-09-06 Remi C. Avohou , Joseph Ben Geloun , Mahouton N. Hounkonnou

A metric graph is a 1-dimensional stratified metric space consisting of vertices and edges or loops glued together. Metric graphs can be naturally used to represent and model data that take the form of noisy filamentary structures, such as…

Statistics Theory · Mathematics 2014-02-10 Fabrizio Lecci , Alessandro Rinaldo , Larry Wasserman
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