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The development of spiking neural network simulation software is a critical component enabling the modeling of neural systems and the development of biologically inspired algorithms. Existing software frameworks support a wide range of…

Neural and Evolutionary Computing · Computer Science 2019-03-27 Hananel Hazan , Daniel J. Saunders , Hassaan Khan , Darpan T. Sanghavi , Hava T. Siegelmann , Robert Kozma

Let $G$ be a finite group. The solubility graph associated with the finite group $G$, denoted by $\Gamma_{\cal S}(G)$, is a simple graph whose vertices are the non-trivial elements of $G$, and there is an edge between two distinct elements…

Group Theory · Mathematics 2020-03-04 B. Akbari , Mark L. Lewis , J. Mirzajani , A. R. Moghaddamfar

While many neural networks focus on layers to process information, the GAIN model uses a grid-based structure to improve biological plausibility and the dynamics of the model. The grid structure helps neurons to interact with their closest…

Neurons and Cognition · Quantitative Biology 2025-06-06 Gage K. R. Hooper

Graph Neural Networks (GNNs) are a powerful representational tool for solving problems on graph-structured inputs. In almost all cases so far, however, they have been applied to directly recovering a final solution from raw inputs, without…

Machine Learning · Statistics 2020-01-16 Petar Veličković , Rex Ying , Matilde Padovano , Raia Hadsell , Charles Blundell

We introduce GraSPy, a Python library devoted to statistical inference, machine learning, and visualization of random graphs and graph populations. This package provides flexible and easy-to-use algorithms for analyzing and understanding…

Social and Information Networks · Computer Science 2019-10-25 Jaewon Chung , Benjamin D. Pedigo , Eric W. Bridgeford , Bijan K. Varjavand , Hayden S. Helm , Joshua T. Vogelstein

With the advent of Grid and application technologies, scientists and engineers are building more and more complex applications to manage and process large data sets, and execute scientific experiments on distributed resources. Such…

Distributed, Parallel, and Cluster Computing · Computer Science 2007-05-23 Jia Yu , Rajkumar Buyya

We present in this paper our solver for logic grid puzzles. The approach used by our algorithm mimics the way a human would try to solve the same problem. Every progress made during the solving process is accompanied by a detailed…

Artificial Intelligence · Computer Science 2019-10-16 Guillaume Escamocher , Barry O'Sullivan

We explore various techniques to incorporate grid-like layout conventions into a force-directed, constraint-based graph layout framework. In doing so we are able to provide high-quality layout---with predominantly axis-aligned edges---that…

Human-Computer Interaction · Computer Science 2013-08-30 Steve Kieffer , Tim Dwyer , Kim Marriott , Michael Wybrow

'lintsampler' provides a Python implementation of a technique we term 'linear interpolant sampling': an algorithm to efficiently draw pseudo-random samples from an arbitrary probability density function (PDF). First, the PDF is evaluated on…

Computation · Statistics 2024-10-10 Aneesh P. Naik , Michael S. Petersen

Graphs are quickly emerging as a leading abstraction for the representation of data. One important application domain originates from an emerging discipline called "connectomics". Connectomics studies the brain as a graph; vertices…

This paper presents gnss_lib_py, a Python library used to parse, analyze, and visualize data from a variety of GNSS (Global Navigation Satellite Systems) data sources. The gnss_lib_py library's ease of use, modular capabilities, testing…

Robotics · Computer Science 2024-08-20 Derek Knowles , Ashwin Vivek Kanhere , Daniel Neamati , Grace Gao

Order diagrams are an important tool to visualize the complex structure of ordered sets. Favorable drawings of order diagrams, i.e., easily readable for humans, are hard to come by, even for small ordered sets. Many attempts were made to…

Computational Geometry · Computer Science 2023-12-29 Dominik Dürrschnabel , Tom Hanika , Gerd Stumme

Graph transformation approaches have been successfully used to analyse and design chemical and biological systems. Here we build on top of a DPO framework, in which molecules are modelled as typed attributed graphs and chemical reactions…

Logic in Computer Science · Computer Science 2019-11-04 Jakob Lykke Andersen , Marc Hellmuth , Daniel Merkle , Nikolai Nøjgaard , Marco Peressotti

Graph Neural Networks (GNNs) have emerged as powerful tools for learning over graph-structured data, yet recent studies have shown that their performance gains are beginning to plateau. In many cases, well-established models such as GCN and…

Machine Learning · Computer Science 2026-02-13 Mohit Meena , Yash Punjabi , Abhishek A , Vishal Sharma , Mahesh Chandran

While physics conveys knowledge of nature built from an interplay between observations and theory, it has been considered less importantly in deep neural networks. Especially, there are few works leveraging physics behaviors when the…

Machine Learning · Computer Science 2019-02-12 Sungyong Seo , Yan Liu

The growing complexity of the power grid, driven by increasing share of distributed energy resources and by massive deployment of intelligent internet-connected devices, requires new modelling tools for planning and operation. Physics-based…

Machine Learning · Statistics 2018-11-26 Francesco Fusco

Graph neural networks (GNNs) are the predominant approach for graph-based machine learning. While neural networks have shown great performance at learning useful representations, they are often criticized for their limited high-level…

Machine Learning · Computer Science 2024-07-09 Markus Zopf , Francesco Alesiani

There is significant interest in using modern neural networks for scientific applications due to their effectiveness in modeling highly complex, non-linear problems in a data-driven fashion. However, a common challenge is to verify the…

Computational Physics · Physics 2019-10-07 Rushil Anirudh , Jayaraman J. Thiagarajan , Shusen Liu , Peer-Timo Bremer , Brian K. Spears

A fusion boundary-plasma domain is defined by axisymmetric magnetic surfaces where the geometry is often complicated by the presence of one or more X-points; and modeling boundary plasmas usually relies on computational grids that account…

Plasma Physics · Physics 2022-03-14 B. M. Garcia , M. V. Umansky , J. Watkins , J. Guterl , O. Izacard

In this paper we show that states, transitions and behavior of concurrent systems can often be modeled as sheaves over a suitable topological space. In this context, geometric logic can be used to describe which local properties (i.e.…

Logic in Computer Science · Computer Science 2008-10-17 Viorica Sofronie-Stokkermans