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The discovery of new ionizable lipids for efficient lipid nanoparticle (LNP)-mediated RNA delivery remains a critical bottleneck for RNA-based therapeutics development. Recent advances have highlighted the potential of machine learning (ML)…

Fully Programmable Valve Array (FPVA) has emerged as a new architecture for the next-generation flow-based microfluidic biochips. This 2D-array consists of regularly-arranged valves, which can be dynamically configured by users to realize…

Emerging Technologies · Computer Science 2017-05-16 Chunfeng Liu , Bing Li , Bhargab B. Bhattacharya , Krishnendu Chakrabarty , Tsung-Yi Ho , Ulf Schlichtmann

Accumulation of standardized data collections is opening up novel opportunities for holistic characterization of genome function. The limited scalability of current preprocessing techniques has, however, formed a bottleneck for full…

Quantitative Methods · Quantitative Biology 2013-04-09 Leo Lahti , Aurora Torrente , Laura L. Elo , Alvis Brazma , Johan Rung

Inverse protein folding, the process of designing sequences that fold into a specific 3D structure, is crucial in bio-engineering and drug discovery. Traditional methods rely on experimentally resolved structures, but these cover only a…

Biomolecules · Quantitative Biology 2023-11-27 Igor Melnyk , Aurelie Lozano , Payel Das , Vijil Chenthamarakshan

Lipid membranes, the barrier defining living cells and many of their sub-compartments, bind to a wide variety of nano- and micro-meter sized objects. In the presence of strong adhesive forces, membranes can strongly deform and wrap the…

Diffusion models have emerged as a leading framework in generative modeling, poised to transform the traditionally slow and costly process of drug discovery. This review provides a systematic comparison of their application in designing two…

Machine Learning · Computer Science 2025-11-27 Yiquan Wang , Yahui Ma , Yuhan Chang , Jiayao Yan , Jialin Zhang , Minnuo Cai , Kai Wei

The growing demand for new microelectronic devices and pharmaceutical advancements has heightened interest in inkjet printing as a means of high-precision manufacturing technique. This study leverages data-driven analyses to optimize…

Fluid Dynamics · Physics 2025-01-24 Ali R. Hashemi , Angela M. Ares de Parga-Regalado , Pavel B. Ryzhakov

Label-free detecting multiple analytes in a high-throughput fashion has been one of the long-sought goals in biosensing applications. Yet, for all-optical approaches, interfacing state-of-the-art label-free techniques with microfluidics…

Quantitative Methods · Quantitative Biology 2023-08-14 Alexia Stollmann , Jose Garcia-Guirado , Jae-Sang Hong , Hyungsoon Im , Hakho Lee , Jaime Ortega Arroyo , Romain Quidant

Analysis of nanoscale liquids, including wetting and flow phenomena, is a scientific challenge with far reaching implications for industrial technologies. We report the conception, development, and application of an integrated platform for…

Instrumentation and Detectors · Physics 2017-11-27 M. Engel , P. W. Bryant , R. F. Neumann , R. Giro , C. Feger , P. Avouris , M. Steiner

Polydimethylsiloxane (PDMS) microfluidic devices have become a standard tool for engineering cells and multicellular networks in vitro. However, the reservoirs, or through-holes where cells access the devices, are usually fabricated…

Applied Physics · Physics 2020-12-02 Taiki Takemuro , Hideaki Yamamoto , Shigeo Sato , Ayumi Hirano-Iwata

We develop a quantitative framework to determine the minimal periodic supercell required for representative simulations of capillarity-screened Darcy flow in stationary random, polydisperse granular media. The microstructure is…

Soft Condensed Matter · Physics 2026-04-20 Christian Tantardini , Fernando Alonso-Marroquin

Soft interfaces formed by lipid membranes are fundamental to living cells, synthetic cells, and membrane-based soft materials. However, a quantitative framework linking molecular organization with nonlinear interfacial mechanics remains…

Soft Condensed Matter · Physics 2026-01-27 Kazutoshi Masuda , Miho Yanagisawa

We present a maskless microscope projection lithography system (MPLS), in which photomasks have been replaced by a Digital Micromirror Device type spatial light modulator (DMD, Texas Instruments). Employing video projector technology high…

Quantitative Methods · Quantitative Biology 2009-11-13 Thomas Naiser , Timo Mai , Wolfgang Michel , Albrecht Ott

Image processing and pattern recognition offer a useful and versatile method for optically characterizing drops of a colloidal solution during the drying process and in its final state. This paper exploits image processing techniques…

Soft Condensed Matter · Physics 2020-02-11 Anusuya Pal , Amalesh Gope , Germano S. Iannacchione

Multilayer metasurfaces (MLMs) represent a versatile type of three-dimensional optical metamaterials that could enable ultra-thin and multi-functional photonic components. Herein we demonstrate an approach to readily fabricate MLMs…

Optics · Physics 2019-09-17 Esteban Bermúdez-Ureña , Ullrich Steiner

The scarcity of organs for transplant has led to large waiting lists of very sick patients. In drug development, the time required for human trials greatly increases the time to market. Drug companies are searching for alternative…

Tissues and Organs · Quantitative Biology 2015-07-28 Ali Bakhshinejad , Roshan M D'Souza

We study phase behaviours of lipid--bilayer vesicles functionalised by ligand--receptor complexes made of synthetic DNA by introducing a modelling framework and a dedicated experimental platform. In particular, we perform Monte Carlo…

Soft Condensed Matter · Physics 2016-08-23 S. J. Bachmann , J. Kotar , L. Parolini , A. Šarić , P. Cicuta , L. Di Michele , B. M. Mognetti

We here propose an automated pipeline for the microscopy image-based characterization of catalytically active inclusion bodies (CatIBs), which includes a fully automatic experimental high-throughput workflow combined with a hybrid approach…

Quantitative Methods · Quantitative Biology 2022-10-03 Karina Ruzaeva , Kira Küsters , Wolfgang Wiechert , Benjamin Berkels , Marco Oldiges , Katharina Nöh

Ordered nanoarrays, i.e. regular patterns of quantum structures at the nanometre scale, have recently been synthesized in a wide range of systems. Here I explore a possible route to technological exploitation: assuming a simple form of…

Other Condensed Matter · Physics 2007-05-23 Simon C. Benjamin

Microgels are cross-linked, colloidal polymer networks with great potential for stimuli-response release in drug-delivery applications, as their size in the nanometer range allows them to pass human cell boundaries. For applications with…

Computational Engineering, Finance, and Science · Computer Science 2023-09-01 Luise F. Kaven , Artur M. Schweidtmann , Jan Keil , Jana Israel , Nadja Wolter , Alexander Mitsos
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