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The emergence of various medical large language models (LLMs) in the medical domain has highlighted the need for unified evaluation standards, as manual evaluation of LLMs proves to be time-consuming and labor-intensive. To address this…

Computation and Language · Computer Science 2023-12-21 Yan Cai , Linlin Wang , Ye Wang , Gerard de Melo , Ya Zhang , Yanfeng Wang , Liang He

Recently, machine learning methods have gained significant traction in scientific computing, particularly for solving Partial Differential Equations (PDEs). However, methods based on deep neural networks (DNNs) often lack convergence…

Artificial Intelligence · Computer Science 2025-06-16 Li Liu , Heng Yong

Data-driven science is an emerging paradigm where scientific discoveries depend on the execution of computational AI models against rich, discipline-specific datasets. With modern machine learning frameworks, anyone can develop and execute…

Machine Learning · Computer Science 2022-08-09 Seth Ockerman , John Wu , Christopher Stewart

Unraveling the hierarchical structure-property relationships is the central challenge of materials science, necessitating the interpretation of data across vast physical scales from micro to macro. Despite the rapid integration of Large…

Digital Libraries · Computer Science 2026-03-23 Yuting Zheng , Zijian Chen , Qi Jia

Despite the remarkable progress of Vision-Language Models (VLMs) in adopting "Thinking-with-Images" capabilities, accurately evaluating the authenticity of their reasoning process remains a critical challenge. Existing benchmarks mainly…

Computer Vision and Pattern Recognition · Computer Science 2026-01-21 Xuchen Li , Xuzhao Li , Renjie Pi , Shiyu Hu , Jian Zhao , Jiahui Gao

Composable AI offers a scalable and effective paradigm for tackling complex AI tasks by decomposing them into sub-tasks and solving each sub-task using ready-to-use well-trained models. However, systematically evaluating methods under this…

Artificial Intelligence · Computer Science 2025-08-05 Tung-Thuy Pham , Duy-Quan Luong , Minh-Quan Duong , Trung-Hieu Nguyen , Thu-Trang Nguyen , Son Nguyen , Hieu Dinh Vo

Although many benchmarks evaluate the reasoning abilities of Large Language Models (LLMs) within domains such as mathematics, coding, or data wrangling, few abstract away from domain specifics to examine reasoning as a capability in and of…

Computation and Language · Computer Science 2026-02-10 Atharva Naik , Prakam , Yash Mathur , Darsh Agrawal , Manav Kapadnis , Yuwei An , Clayton Marr , Carolyn Rose , David Mortensen

We study the task of automatically finding evidence relevant to hypotheses in biomedical papers. Finding relevant evidence is an important step when researchers investigate scientific hypotheses. We introduce EvidenceBench to measure models…

We introduce a comprehensive framework for modeling single cell transcriptomic responses to perturbations, aimed at standardizing benchmarking in this rapidly evolving field. Our approach includes a modular and user-friendly model…

Process Mining is established in research and industry systems to analyze and optimize processes based on event data from information systems. Within this work, we accomodate process mining techniques to Cyber-Physical Systems. To capture…

Software Engineering · Computer Science 2025-02-21 Hendrik Reiter , Patrick Rathje , Olaf Landsiedel , Wilhelm Hasselbring

Large language models are emerging as powerful tools for scientific law discovery, a foundational challenge in AI-driven science. However, existing benchmarks for this task suffer from a fundamental methodological trilemma, forcing a…

Learned representations of scientific documents can serve as valuable input features for downstream tasks without further fine-tuning. However, existing benchmarks for evaluating these representations fail to capture the diversity of…

Computation and Language · Computer Science 2023-11-14 Amanpreet Singh , Mike D'Arcy , Arman Cohan , Doug Downey , Sergey Feldman

Physics-informed neural networks (PINNs) as a means of discretizing partial differential equations (PDEs) are garnering much attention in the Computational Science and Engineering (CS&E) world. At least two challenges exist for PINNs at…

Computational Physics · Physics 2023-01-23 Michael Penwarden , Shandian Zhe , Akil Narayan , Robert M. Kirby

Recent advances in de novo protein binder design have enabled increasing experimental validation, yet reported in silico metrics remain difficult to interpret or compare across studies due to non-standardized evaluation protocols. We…

Quantitative Methods · Quantitative Biology 2026-05-25 Cong Liu , Milong Ren , Jiaqi Guan , Chengyue Gong , Jinyuan Sun , Xinshi Chen , Wenzhi Xiao

Partial Differential Equations (PDE) are fundamental to model different phenomena in science and engineering mathematically. Solving them is a crucial step towards a precise knowledge of the behaviour of natural and engineered systems. In…

Large language models (LLMs) can generate code from natural language, but the extent to which they capture intended program behavior remains unclear. Executable behavioral specifications, defined via preconditions and postconditions,…

Software Engineering · Computer Science 2026-04-15 Zaoyu Chen , Jianbo Dai , Boyu Zhu , Jingdong Wang , Huiming Wang , Xin Xu , Haoyang Yuan , Zhijiang Guo , Xiao-Ming Wu

This paper presents DataSciBench, a comprehensive benchmark for evaluating Large Language Model (LLM) capabilities in data science. Recent related benchmarks have primarily focused on single tasks, easily obtainable ground truth, and…

Computation and Language · Computer Science 2025-02-20 Dan Zhang , Sining Zhoubian , Min Cai , Fengzu Li , Lekang Yang , Wei Wang , Tianjiao Dong , Ziniu Hu , Jie Tang , Yisong Yue

The analysis of tabular datasets is highly prevalent both in scientific research and real-world applications of Machine Learning (ML). Unlike many other ML tasks, Deep Learning (DL) models often do not outperform traditional methods in this…

Machine Learning · Computer Science 2024-08-28 Assaf Shmuel , Oren Glickman , Teddy Lazebnik

Domain-specific software and hardware co-design is encouraging as it is much easier to achieve efficiency for fewer tasks. Agile domain-specific benchmarking speeds up the process as it provides not only relevant design inputs but also…

Large language models are now integrated into many scientific workflows, accelerating data analysis, hypothesis generation, and design space exploration. In parallel with this growth, there is a growing need to carefully evaluate whether…