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Segmentation is a crucial step in microscopy image analysis. Numerous approaches have been developed over the past years, ranging from classical segmentation algorithms to advanced deep learning models. While U-Net remains one of the most…

Image and Video Processing · Electrical Eng. & Systems 2024-09-26 Illia Tsiporenko , Pavel Chizhov , Dmytro Fishman

Large-scale models pre-trained on large-scale datasets have profoundly advanced the development of deep learning. However, the state-of-the-art models for medical image segmentation are still small-scale, with their parameters only in the…

Computer Vision and Pattern Recognition · Computer Science 2023-04-14 Ziyan Huang , Haoyu Wang , Zhongying Deng , Jin Ye , Yanzhou Su , Hui Sun , Junjun He , Yun Gu , Lixu Gu , Shaoting Zhang , Yu Qiao

Accurate brain tumor segmentation in the early stages of the disease is crucial for the treatment's effectiveness, avoiding exhaustive visual inspection of a qualified specialist on 3D MR brain images of multiple protocols (e.g., T1, T2,…

Image and Video Processing · Electrical Eng. & Systems 2024-02-09 Felipe C. R. Salvagnini , Gerson O. Barbosa , Alexandre X. Falcao , Cid A. N. Santos

In brain tumor diagnosis and surgical planning, segmentation of tumor regions and accurate analysis of surrounding normal tissues are necessary for physicians. Pathological variability often renders difficulty to register a well-labeled…

Image and Video Processing · Electrical Eng. & Systems 2020-07-13 Zhongqiang Liu

Split learning (SL) has been proposed to train deep learning models in a decentralized manner. For decentralized healthcare applications with vertical data partitioning, SL can be beneficial as it allows institutes with complementary…

Computer Vision and Pattern Recognition · Computer Science 2022-09-28 Holger R. Roth , Ali Hatamizadeh , Ziyue Xu , Can Zhao , Wenqi Li , Andriy Myronenko , Daguang Xu

A major challenge in brain tumor treatment planning and quantitative evaluation is determination of the tumor extent. The noninvasive magnetic resonance imaging (MRI) technique has emerged as a front-line diagnostic tool for brain tumors…

Computer Vision and Pattern Recognition · Computer Science 2017-06-06 Hao Dong , Guang Yang , Fangde Liu , Yuanhan Mo , Yike Guo

Medical image segmentation data inherently contain uncertainty. This can stem from both imperfect image quality and variability in labeling preferences on ambiguous pixels, which depend on annotator expertise and the clinical context of the…

Image and Video Processing · Electrical Eng. & Systems 2025-07-17 Jiayuan Zhu , Junde Wu , Cheng Ouyang , Konstantinos Kamnitsas , J. Alison Noble

This paper proposes a two-stage segmentation model, variable-input based uncertainty measures and an uncertainty-guided post-processing method for prostate segmentation on 3D magnetic resonance images (MRI). The two-stage model was based on…

Computer Vision and Pattern Recognition · Computer Science 2019-03-07 Huitong Pan , Yushan Feng , Quan Chen , Craig Meyer , Xue Feng

Organ segmentation in CT volumes is an important pre-processing step in many computer assisted intervention and diagnosis methods. In recent years, convolutional neural networks have dominated the state of the art in this task. However,…

Image and Video Processing · Electrical Eng. & Systems 2020-08-25 Roger D. Soberanis-Mukul , Nassir Navab , Shadi Albarqouni

Brain tumor segmentation is a critical task in medical image analysis, aiding in the diagnosis and treatment planning of brain tumor patients. The importance of automated and accurate brain tumor segmentation cannot be overstated. It…

Image and Video Processing · Electrical Eng. & Systems 2024-05-24 Muhammad Ansab Butt , Absaar Ul Jabbar

Accurate segmentation of the stroke lesions using magnetic resonance imaging (MRI) is associated with difficulties due to the complicated anatomy of the brain and the different properties of the lesions. This study introduces the…

Image and Video Processing · Electrical Eng. & Systems 2024-06-11 Muhammad Nouman , Mohamed Mabrok , Essam A. Rashed

Despite recent improvements in the accuracy of brain tumor segmentation, the results still exhibit low levels of confidence and robustness. Uncertainty estimation is one effective way to change this situation, as it provides a measure of…

Image and Video Processing · Electrical Eng. & Systems 2022-07-29 Ke Zou , Xuedong Yuan , Xiaojing Shen , Meng Wang , Huazhu Fu

Gliomas appear with wide variation in their characteristics both in terms of their appearance and location on brain MR images, which makes robust tumour segmentation highly challenging, and leads to high inter-rater variability even in…

Image and Video Processing · Electrical Eng. & Systems 2021-05-25 Vaanathi Sundaresan , Ludovica Griffanti , Mark Jenkinson

This study proposes a deep learning model for the classification and segmentation of brain tumors from magnetic resonance imaging (MRI) scans. The classification model is based on the EfficientNetB1 architecture and is trained to classify…

Image and Video Processing · Electrical Eng. & Systems 2023-06-27 Belal Amin , Romario Sameh Samir , Youssef Tarek , Mohammed Ahmed , Rana Ibrahim , Manar Ahmed , Mohamed Hassan

$\bf{Purpose:}$ The goal of this study was (i) to use artificial intelligence to automate the traditionally labor-intensive process of manual segmentation of tumor regions in pathology slides performed by a pathologist and (ii) to validate…

In image segmentation, there is often more than one plausible solution for a given input. In medical imaging, for example, experts will often disagree about the exact location of object boundaries. Estimating this inherent uncertainty and…

Computer Vision and Pattern Recognition · Computer Science 2020-12-23 Miguel Monteiro , Loïc Le Folgoc , Daniel Coelho de Castro , Nick Pawlowski , Bernardo Marques , Konstantinos Kamnitsas , Mark van der Wilk , Ben Glocker

Whole-body PET/CT scan is an important tool for diagnosing various malignancies (e.g., malignant melanoma, lymphoma, or lung cancer), and accurate segmentation of tumors is a key part for subsequent treatment. In recent years, CNN-based…

Image and Video Processing · Electrical Eng. & Systems 2023-02-27 Hengzhi Xue , Qingqing Fang , Yudong Yao , Yueyang Teng

Deep learning motivated by convolutional neural networks has been highly successful in a range of medical imaging problems like image classification, image segmentation, image synthesis etc. However for validation and interpretability, not…

Image and Video Processing · Electrical Eng. & Systems 2024-08-19 Abhinav Sagar

In the realm of medical diagnostics, rapid advancements in Artificial Intelligence (AI) have significantly yielded remarkable improvements in brain tumor segmentation. Encoder-Decoder architectures, such as U-Net, have played a…

Computer Vision and Pattern Recognition · Computer Science 2025-10-23 Eyad Gad , Seif Soliman , M. Saeed Darweesh

Accurate characterization of glioma is crucial for clinical decision making. A delineation of the tumor is also desirable in the initial decision stages but is a time-consuming task. Leveraging the latest GPU capabilities, we developed a…