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The starting point in quantitative susceptibility mapping (QSM) is a theoretical model that is used to map susceptibility distributions from magnetic field measurements. It requires regularisation techniques to avoid artefacts in the…

Mathematical Physics · Physics 2021-09-07 Rob F. Remis , Peter M. van den Berg

Motivation - The test-retest reliability of quantitative susceptibility mapping (QSM) is affected by parameters of the acquisition protocol such as the angulation of acquisition plane with respect to the B0 field direction and spatial…

Image and Video Processing · Electrical Eng. & Systems 2024-11-26 Shuai Huang , Thomas Denney , Deqiang Qiu

We propose a weakly-supervised multi-view learning approach to learn category-specific surface mapping without dense annotations. We learn the underlying surface geometry of common categories, such as human faces, cars, and airplanes, given…

Computer Vision and Pattern Recognition · Computer Science 2021-05-05 Nishant Rai , Aidas Liaudanskas , Srinivas Rao , Rodrigo Ortiz Cayon , Matteo Munaro , Stefan Holzer

Deep learning methods have become the state of the art for undersampled MR reconstruction. Particularly for cases where it is infeasible or impossible for ground truth, fully sampled data to be acquired, self-supervised machine learning…

Finding automatically multiple lesions in large images is a common problem in medical image analysis. Solving this problem can be challenging if, during optimization, the automated method cannot access information about the location of the…

Computer Vision and Pattern Recognition · Computer Science 2020-03-23 Florian Dubost , Hieab Adams , Pinar Yilmaz , Gerda Bortsova , Gijs van Tulder , M. Arfan Ikram , Wiro Niessen , Meike Vernooij , Marleen de Bruijne

Purpose: To improve repeatability and reproducibility across acquisition parameters and reduce bias in quantitative susceptibility mapping (QSM) of the liver, through development of an optimized regularized reconstruction algorithm for…

Objective: We propose a method for the reconstruction of parameter-maps in Quantitative Magnetic Resonance Imaging (QMRI). Methods: Because different quantitative parameter-maps differ from each other in terms of local features, we propose…

Image and Video Processing · Electrical Eng. & Systems 2023-08-08 Andreas Kofler , Kirsten Miriam Kerkering , Laura Göschel , Ariane Fillmer , Cristoph Kolbitsch

Computational image reconstruction algorithms generally produce a single image without any measure of uncertainty or confidence. Regularized Maximum Likelihood (RML) and feed-forward deep learning approaches for inverse problems typically…

Machine Learning · Computer Science 2020-12-18 He Sun , Katherine L. Bouman

Magnetic resonance imaging (MRI) offers superior soft tissue contrast and is widely used in biomedicine. However, conventional MRI is not quantitative, which presents a bottleneck in image analysis and digital healthcare. Typically,…

We propose an attention-based method that aggregates local image features to a subject-level representation for predicting disease severity. In contrast to classical deep learning that requires a fixed dimensional input, our method operates…

Computer Vision and Pattern Recognition · Computer Science 2018-07-02 Sumedha Singla , Mingming Gong , Siamak Ravanbakhsh , Frank Sciurba , Barnabas Poczos , Kayhan N. Batmanghelich

Patch-level image representation is very important for object classification and detection, since it is robust to spatial transformation, scale variation, and cluttered background. Many existing methods usually require fine-grained…

Computer Vision and Pattern Recognition · Computer Science 2017-05-09 Peng Tang , Xinggang Wang , Zilong Huang , Xiang Bai , Wenyu Liu

A learning-based posterior distribution estimation method, Probabilistic Dipole Inversion (PDI), is proposed to solve quantitative susceptibility mapping (QSM) inverse problem in MRI with uncertainty estimation. A deep convolutional neural…

Image and Video Processing · Electrical Eng. & Systems 2020-04-28 Jinwei Zhang , Hang Zhang , Mert Sabuncu , Pascal Spincemaille , Thanh Nguyen , Yi Wang

Most of the existing semantic segmentation approaches with image-level class labels as supervision, highly rely on the initial class activation map (CAM) generated from the standard classification network. In this paper, a novel…

Computer Vision and Pattern Recognition · Computer Science 2022-09-19 Jinlong Li , Zequn Jie , Xu Wang , Yu Zhou , Xiaolin Wei , Lin Ma

State-of-the-art learned reconstruction methods often rely on black-box modules that, despite their strong performance, raise questions about their interpretability and robustness. Here, we build on a recently proposed image reconstruction…

Image and Video Processing · Electrical Eng. & Systems 2026-05-19 Joshua Schulz , David Schote , Christoph Kolbitsch , Kostas Papafitsoros , Andreas Kofler

Undersampling the k-space in MRI allows saving precious acquisition time, yet results in an ill-posed inversion problem. Recently, many deep learning techniques have been developed, addressing this issue of recovering the fully sampled MR…

Image and Video Processing · Electrical Eng. & Systems 2020-07-28 Mélanie Gaillochet , Kerem C. Tezcan , Ender Konukoglu

One of the significant challenges of deep neural networks is that the complex nature of the network prevents human comprehension of the outcome of the network. Consequently, the applicability of complex machine learning models is limited in…

Computer Vision and Pattern Recognition · Computer Science 2020-06-22 Shailja Thakur , Sebastian Fischmeister

Purpose: Undersampling is used to reduce the scan time for high-resolution 3D magnetic resonance imaging. In order to achieve better image quality and avoid manual parameter tuning, we propose a probabilistic Bayesian approach to recover…

Image and Video Processing · Electrical Eng. & Systems 2022-10-20 Shuai Huang , James J. Lah , Jason W. Allen , Deqiang Qiu

The data-driven approach of supervised learning methods has limited applicability in solving dipole inversion in Quantitative Susceptibility Mapping (QSM) with varying scan parameters across different objects. To address this generalization…

Image and Video Processing · Electrical Eng. & Systems 2023-08-21 Zhuang Xiong , Yang Gao , Yin Liu , Amir Fazlollahi , Peter Nestor , Feng Liu , Hongfu Sun

This paper proposes a novel self-supervised learning method, RELAX-MORE, for quantitative MRI (qMRI) reconstruction. The proposed method uses an optimization algorithm to unroll a model-based qMRI reconstruction into a deep learning…

Biological Physics · Physics 2023-07-26 Wanyu Bian , Albert Jang , Fang Liu

We propose a scalable framework for the learning of high-dimensional parametric maps via adaptively constructed residual network (ResNet) maps between reduced bases of the inputs and outputs. When just few training data are available, it is…