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Complex systems with global interactions tend to be stable if interactions between components are sufficiently homogeneous. In biological systems, which often have small copy numbers and interactions mediated by diffusing agents, noise and…

Biological Physics · Physics 2023-04-14 Fabrizio Olmeda , Steffen Rulands

The spatial organization of individuals and their interactions in communities are important factors known to preserve diversity in many complex systems. Inspired by metapopulation models from ecology, we study opinion formation using a…

Physics and Society · Physics 2026-05-19 Tim Mauch , Thilo Gross

This paper investigates the conditions for the stability and emergence of patterns in a new three-component reaction-diffusion system. The system describes the coexistence and interaction of water reservoirs, vegetation, and bushfire…

Analysis of PDEs · Mathematics 2026-04-14 Serena Dipierro , Enrico Valdinoci

Differential diffusion is a source of instability in population dynamics systems when species diffuse with different rates. Predator-prey systems show this instability only under certain specific conditions, usually requiring Holling-type…

Populations and Evolution · Quantitative Biology 2020-01-01 Luciano Stucchi , Javier Galeano , Desiderio A. Vasquez

We investigate the effects of cooperativity between contagion processes that spread and persist in a host population. We propose and analyze a dynamical model in which individuals that are affected by one transmissible agent $A$ exhibit a…

Physics and Society · Physics 2017-11-22 Li Chen , Fakhteh Ghanbarnejad , Dirk Brockmann

The different cell types in a living organism acquire their identity through the process of cell differentiation in which the multipotent progenitor cells differentiate into distinct cell types. Experimental evidence and analysis of…

Cell Behavior · Quantitative Biology 2015-06-19 Mainak Pal , Sayantari Ghosh , Indrani Bose

In this paper, we investigate the emergence of a predator-prey system with Ivlev-type functional response and reaction-diffusion. We study how diffusion affects the stability of predator-prey coexistence equilibrium and derive the…

Populations and Evolution · Quantitative Biology 2008-01-08 Weiming Wang , Lei Zhang , Hailing Wang , Zhenqing Li

This paper aims at understanding the longtime behaviors of a reducible cooperative system with nonlocal diffusions and different free boundaries, describing the interactions of two mutually beneficial species. Compared with the irreducible…

Analysis of PDEs · Mathematics 2025-01-03 Lei Li , Mingxin Wang

Organisms modulate their fitness in heterogeneous environments by dispersing. Prior work shows that there is selection against "unconditional" dispersal in spatially heterogeneous environments. "Unconditional" means individuals disperse at…

Populations and Evolution · Quantitative Biology 2011-09-28 Sebastian J. Schreiber , Chi-Kwong Li

The advent of high-throughput sequencing technologies has made data from DNA material readily available, leading to a surge of microbiome-related research establishing links between markers of microbiome health and specific outcomes.…

Methodology · Statistics 2018-06-19 Susheela P. Singh , Ana-Maria Staicu , Robert R. Dunn , Noah Fierer , Brian J. Reich

The construction of a network of cell-to-cell contacts makes it possible to characterize the patterns and spatial organisation of tissues. Such networks are highly dynamic, depending on the changes of the tissue architecture caused by cell…

Tissues and Organs · Quantitative Biology 2013-06-25 Attila Csikász-Nagy , Luis M. Escudero , Martial Guillaud , Sean Sedwards , Buzz Baum , Matteo Cavaliere

Several different enzymes display an apparent diffusion coefficient that increases with the concentration of their substrate. Moreover, their motion becomes directed in substrate gradients. Currently, there are several competing models for…

Biological Physics · Physics 2020-09-23 Giovanni Giunta , Hamid Seyed-Allaei , Ulrich Gerland

Identifying the mechanism of intercellular feedback regulation is critical for the basic understanding of tissue growth control in organisms. In this paper, we analyze a tissue growth model consisting of a single lineage of two cell types…

Tissues and Organs · Quantitative Biology 2021-09-22 Mao-Xiang Wang , Arthur Lander , Pik-Yin Lai

Interactions among multiple infectious agents are increasingly recognized as a fundamental issue in the understanding of key questions in public health, regarding pathogen emergence, maintenance, and evolution. The full description of…

Populations and Evolution · Quantitative Biology 2013-08-21 Chiara Poletto , Sandro Meloni , Vittoria Colizza , Yamir Moreno , Alessandro Vespignani

Search for possible relationships between phylogeny and ontogeny is one of the most important issues in the field of evolutionary developmental biology. By representing developmental dynamics of spatially located cells with gene expression…

Populations and Evolution · Quantitative Biology 2015-04-01 Takahiro Kohsokabe , Kunihiko Kaneko

The reaction-diffusion processes in a growing domain involves a dilution term that modifies the properties of the homogeneous state that, in contrast to a fixed domain, depends on time. We study how the dilution term changes the steady…

Pattern Formation and Solitons · Physics 2023-08-24 Aldo Ledesma-Durán

Formation of diverse patterns in spatially extended reaction-diffusion systems is an important aspect of study which is pertinent to many chemical and biological processes. Of special interest is the peculiar phenomenon of chimera state…

Adaptation and Self-Organizing Systems · Physics 2021-06-16 Srilena Kundu , Paulsamy Muruganandam , Dibakar Ghosh , M. Lakshmanan

We propose a model to study the spatiotemporal dynamics of biocrust and vegetation cover on sand dunes. The model consists of two coupled partial nonlinear differential equations and includes diffusion and advection terms for modeling the…

Pattern Formation and Solitons · Physics 2022-05-18 Hezi Yizhaq , Yosef Ashkenazy

The development of multicellular organisms proceeds through a series of morphogenetic and cell-state transitions, transforming homogeneous zygotes into complex adults by a process of self-organization. Many of these transitions are achieved…

Tissues and Organs · Quantitative Biology 2020-07-08 Jake Cornwall Scoones , Deb Sankar Banerjee , Shiladitya Banerjee

We study the collective dynamics of colloidal suspensions in the presence of a time-dependent potential, by means of dynamical density functional theory. We consider a non-linear diffusion equation for the density and show that spatial…

Soft Condensed Matter · Physics 2017-06-08 N. A. M. Araujo , D. A. Zezyulin , V. V. Konotop , M. M. Telo da Gama