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Animal movement exhibits complex behavior which can be influenced by unobserved environmental conditions. We propose a model which allows for a spatially-varying movement rate and spatially-varying drift through a semiparametric potential…

Applications · Statistics 2017-02-28 James C. Russell , Ephraim M. Hanks , Murali Haran , David P. Hughes

The Allee effect describes a decline in population fitness at low densities, potentially leading to extinction. In predator-prey systems, an emergent Allee effect can arise due to interactions such as density-dependent maturation rates and…

Populations and Evolution · Quantitative Biology 2025-03-25 Carlos Granados , Leon A. Valencia

Ecological systems are complex dynamical systems. Modelling efforts on ecosystems' dynamical stability have revealed that population dynamics, being highly nonlinear, can be governed by complex fluctuations. Indeed, experimental and field…

Dynamical Systems · Mathematics 2020-02-19 Lluís Alsedà , José Tomás Lázaro , Ricard Solé , Blai Vidiella , Josep Sardanyés

The hydrodynamical model of the collective behavior of animals consists of the Euler equation with additional non-local forcing terms representing the repulsive and attractive forces among individuals. This paper deals with the system…

Analysis of PDEs · Mathematics 2021-07-01 Pavel Ludvik , Vaclav Macha

Endangered populations often experience limited growth ability at low densities, a phenomenon described by the Allee effect. In this thesis, we investigate a predator-prey model incorporating the Allee effect within a two-dimensional…

Populations and Evolution · Quantitative Biology 2025-12-15 Junhui Hu

We propose a novel problem formulation of continuous-time information propagation on heterogenous networks based on jump stochastic differential equations (SDE). The structure of the network and activation rates between nodes are naturally…

Numerical Analysis · Mathematics 2018-10-26 Yaohua Zang , Gang Bao , Xiaojing Ye , Hongyuan Zha , Haomin Zhou

Simulation of population dynamics is a central research theme in computational biology, which contributes to understanding the interactions between predators and preys. Conventional mathematical tools of this theme, however, are incapable…

Multiagent Systems · Computer Science 2020-02-11 Jun Yamada , John Shawe-Taylor , Zafeirios Fountas

Differential equations (DEs) are commonly used to describe dynamic systems evolving in one (ordinary differential equations or ODEs) or in more than one dimensions (partial differential equations or PDEs). In real data applications the…

Methodology · Statistics 2013-11-25 Gianluca Frasso , Jonathan Jaeger , Philippe Lambert

Spatially extended population dynamics models that incorporate intrinsic noise serve as case studies for the role of fluctuations and correlations in biological systems. Including spatial structure and stochastic noise in predator-prey…

Statistical Mechanics · Physics 2018-01-09 Ulrich Dobramysl , Mauro Mobilia , Michel Pleimling , Uwe C. Täuber

Predicting outcomes and planning interactions with the physical world are long-standing goals for machine learning. A variety of such tasks involves continuous physical systems, which can be described by partial differential equations…

Machine Learning · Computer Science 2020-01-22 Philipp Holl , Vladlen Koltun , Nils Thuerey

Stochastic discriminative EM (sdEM) is an online-EM-type algorithm for discriminative training of probabilistic generative models belonging to the exponential family. In this work, we introduce and justify this algorithm as a stochastic…

Machine Learning · Computer Science 2017-04-05 Andres R. Masegosa

Stochastic differential equations (SDEs) are well suited to modelling noisy and irregularly sampled time series found in finance, physics, and machine learning. Traditional approaches require costly numerical solvers to sample between…

Machine Learning · Computer Science 2025-10-30 Naoki Kiyohara , Edward Johns , Yingzhen Li

Mathematical modelling and numerical simulations of interaction populations are crucial topics in systems biology. The interactions of ecological models may occur among individuals of the same species or individuals of different species.…

Quantitative Methods · Quantitative Biology 2017-09-04 Sarbaz H. A. Khoshnaw

There are various examples of phenotypic plasticity in ecosystems that serve as the basis for a wide range of inducible defences against predation. These strategies include camouflage, burrowing, mimicry, evasive actions, and even…

Populations and Evolution · Quantitative Biology 2025-01-06 Sangeeta Saha , Swadesh Pal , Roderick Melnik

The aim of our study is to describe the dynamics of ant battles, with reference to laboratory experiments, by means of a chemical stochastic model. We focus on ants behavior as an interesting topic in order to predict the ecological…

Populations and Evolution · Quantitative Biology 2016-05-09 Alisa Santarlasci , Gianluca Martelloni , Filippo Frizzi , Giacomo Santini , Franco Bagnoli

We analyze predator-prey dynamics in one dimension in which a Brownian predator adopts a chasing strategy that consists in stochastically resetting its current position to locations previously visited by a diffusive prey. We study three…

Disordered Systems and Neural Networks · Physics 2019-12-05 J. Quetzalcoatl Toledo-Marin , Denis Boyer , Francisco J. Sevilla

Stochastic differential equations (SDEs) describe dynamical systems where deterministic flows, governed by a drift function, are superimposed with random fluctuations, dictated by a diffusion function. The accurate estimation (or discovery)…

Machine Learning · Computer Science 2025-10-22 Patrick Seifner , Kostadin Cvejoski , David Berghaus , Cesar Ojeda , Ramses J. Sanchez

Collective motion in animal groups emerges from the interplay between individual variability and social coordination, yet connecting these scales quantitatively has remained a major challenge.Using high-resolution trajectories of schooling…

Other Condensed Matter · Physics 2026-01-15 Elena G. de Lamo , M. Carmen Miguel , Romualdo Pastor-Satorras

We investigate existence of stationary solutions to an aggregation/diffusion system of PDEs, modelling a two species predator-prey interaction. In the model this interaction is described by non-local potentials that are mutually…

Analysis of PDEs · Mathematics 2019-04-11 S. Fagioli , Y. Jaafra

Deriving emergent patterns from models of biological processes is a core concern of mathematical biology. In the context of partial differential equations (PDEs), these emergent patterns sometimes appear as local minimisers of a…

Analysis of PDEs · Mathematics 2022-10-05 Valeria Giunta , Thomas Hillen , Mark A. Lewis , Jonathan R. Potts
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