Related papers: Computing maximal palindromes in non-standard matc…
Machine-translated text plays an important role in modern life by smoothing communication from various communities using different languages. However, unnatural translation may lead to misunderstanding, a detector is thus needed to avoid…
In the problem of the longest common substring with $k$ mismatches we are given two strings $X, Y$ and must find the maximal length $\ell$ such that there is a length-$\ell$ substring of $X$ and a length-$\ell$ substring of $Y$ that differ…
Text simplification (TS) rephrases long sentences into simplified variants while preserving inherent semantics. Traditional sequence-to-sequence models heavily rely on the quantity and quality of parallel sentences, which limits their…
Ryser's max term rank formula with graph theoretic terminology is equivalent to a characterization of degree sequences of simple bipartite graphs with matching number at least $\ell$. In a previous paper by the authors, a generalization was…
We propose a new linear-size data structure which provides a fast access to all palindromic substrings of a string or a set of strings. This structure inherits some ideas from the construction of both the suffix trie and suffix tree. Using…
Applying a method to reconstruct a phylogenetic tree from random data provides a way to detect whether that method has an inherent bias towards certain tree `shapes'. For maximum parsimony, applied to a sequence of random 2-state data, each…
Finding analytically the statistics of the longest common subsequence (LCS) of a pair of random sequences drawn from c alphabets is a challenging problem in computational evolutionary biology. We present exact asymptotic results for the…
Symmetric fix-free codes are prefix condition codes in which each codeword is required to be a palindrome. Their study is motivated by the topic of joint source-channel coding. Although they have been considered by a few communities they…
In the Dictionary-based String Matching (DSM) problem, a retrieval system has access to a source sequence and stores the position of a certain number of strings in a posting table. When a user inquires the position of a string, the…
In this thesis, two aspects of string theory are discussed, tensionless strings and supersymmetric sigma models. The equivalent to a massless particle in string theory is a tensionless string. Even almost 30 years after it was first…
Tuffley and Steel (1997) proved that Maximum Likelihood and Maximum Parsimony methods in phylogenetics are equivalent for sequences of characters under a simple symmetric model of substitution with no common mechanism. This result has been…
Recurrent neural network grammars (RNNGs) are generative models of (tree,string) pairs that rely on neural networks to evaluate derivational choices. Parsing with them using beam search yields a variety of incremental complexity metrics…
The Longest Common Subsequence (LCS) Problem asks for the longest sequence of (non-contiguous) matches between two given strings of characters. Using extensive Monte Carlo simulations, we find a finite size scaling law of the form E(L)/N =C…
We describe a method for automatic word sense disambiguation using a text corpus and a machine-readable dictionary (MRD). The method is based on word similarity and context similarity measures. Words are considered similar if they appear in…
Motivation: Word-based or `alignment-free' methods for phylogeny reconstruction are much faster than traditional approaches, but they are generally less accurate. Most of these methods calculate pairwise distances for a set of input…
With the ever-increasing quantity and variety of data worldwide, the Web has become a rich repository of mathematical formulae. This necessitates the creation of robust and scalable systems for Mathematical Information Retrieval, where…
We consider the problem of finding repetitive structures and inherent patterns in a given string $\s{s}$ of length $n$ over a finite totally ordered alphabet. A border $\s{u}$ of a string $\s{s}$ is both a prefix and a suffix of $\s{s}$…
We consider string matching with variable length gaps. Given a string $T$ and a pattern $P$ consisting of strings separated by variable length gaps (arbitrary strings of length in a specified range), the problem is to find all ending…
Starting with valise supermultiplets obtained from 0-branes plus field redefinitions, valise adinkra networks, and the "Garden Algebra," we discuss an architecture for algorithms that (starting from on-shell theories and, through a…
Prefix normal words are binary words in which each prefix has at least the same number of $\so$s as any factor of the same length. Firstly introduced by Fici and Lipt\'ak in 2011, the problem of determining the index of the prefix…