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Increasing pressures on the environment are generating an ever-increasing need to manage animal and plant populations sustainably, and to protect and rebuild endangered populations. Effective management requires reliable mathematical…

Methodology · Statistics 2009-09-29 Stephen T. Buckland , Ken B. Newman , Carmen Fernández , Len Thomas , John Harwood

Many scientific problems focus on observed patterns of change or on how to design a system to achieve particular dynamics. Those problems often require fitting differential equation models to target trajectories. Fitting such models can be…

Quantitative Methods · Quantitative Biology 2023-12-27 Steven A. Frank

How to maintain relative high diversity is important to avoid premature convergence in population-based optimization methods. Island model is widely considered as a major approach to achieve this because of its flexibility and high…

Neural and Evolutionary Computing · Computer Science 2018-01-08 Qinxue Meng , Jia Wu , John Ellisy , Paul J. Kennedy

This paper presents a new parameter estimation algorithm for the adaptive control of a class of time-varying plants. The main feature of this algorithm is a matrix of time-varying learning rates, which enables parameter estimation error…

Optimization and Control · Mathematics 2021-11-18 Joseph E. Gaudio , Anuradha M. Annaswamy , Eugene Lavretsky , Michael A. Bolender

Spatially explicit models have been widely used in today's mathematical ecology and epidemiology to study persistence and extinction of populations as well as their spatial patterns. Here we extend the earlier work--static dispersal between…

Populations and Evolution · Quantitative Biology 2009-07-01 Quan-Xing Liu , Rong-Hua Wang , Zhen Jin

We investigate portfolio optimization in financial markets from a trading and risk management perspective. We term this task Risk-Aware Trading Portfolio Optimization (RATPO), formulate the corresponding optimization problem, and propose an…

Risk Management · Quantitative Finance 2025-03-07 Marco Bianchetti , Gabriele D'Acunto , Gianmarco De Francisci Morales , Yuko Kuroki , Marco Scaringi , Fabio Vitale

Bayesian inference methods are applied within a Bayesian hierarchical modelling framework to the problems of joint state and parameter estimation, and of state forecasting. We explore and demonstrate the ideas in the context of a simple…

Applications · Statistics 2012-11-09 John Parslow , Noel Cressie , Edward P. Campbell , Emlyn Jones , Lawrence Murray

Ecological connectivity in coastal oceanic waters is mediated by dispersion of the early life stages of marine organisms and conditions the structure of biological communities and the provision of ecosystem services. Integrated management…

Populations and Evolution · Quantitative Biology 2020-06-25 Andres Ospina-Alvarez , Silvia de Juan , Katrina J Davis , Catherine González , Sergio A Navarrete , Miriam Fernández

Monitoring species distribution is vital for conservation efforts, enabling the assessment of environmental impacts and the development of effective preservation strategies. Traditional data collection methods, including citizen science,…

Machine Learning · Computer Science 2025-10-23 Chirag Padubidri , Pranesh Velmurugan , Andreas Lanitis , Andreas Kamilaris

This paper presents an advancement to an approach for model-independent surrogate-based optimization with adaptive batch sampling, known as Adaptive Model Refinement (AMR). While the original AMR method provides unique decisions with…

Optimization and Control · Mathematics 2019-06-04 Payam Ghassemi , Sumeet Sanjay Lulekar , Souma Chowdhury

Encouraged by decision makers' appetite for future information on topics ranging from elections to pandemics, and enabled by the explosion of data and computational methods, model based forecasts have garnered increasing influence on a…

Applications · Statistics 2022-07-22 Carl Boettiger

A system made up of N interacting species is considered. Self-reaction terms are assumed of the logistic type. Pairwise interactions take place among species according to different modalities, thus yielding a complex asymmetric disordered…

Statistical Mechanics · Physics 2018-11-14 Giulia Cencetti , Franco Bagnoli , Giorgio Battistelli , Luigi Chisci , Duccio Fanelli

Mathematical models of biological populations commonly use discrete structure classes to capture trait variation among individuals (e.g. age, size, phenotype, intracellular state). Upscaling these discrete models into continuum descriptions…

Populations and Evolution · Quantitative Biology 2026-03-18 Eleonora Agostinelli , Keith L. Chambers , Helen M. Byrne , Mohit P. Dalwadi

Among the most relevant processes in the Earth system for human habitability are quasi-periodic, ocean-driven multi-year events whose dynamics are currently incompletely characterized by physical models, and hence poorly predictable. This…

Atmospheric and Oceanic Physics · Physics 2023-08-09 Matthew Bonas , Christopher K. Wikle , Stefano Castruccio

Climate change and fisheries jointly shape the resilience of the Barents Sea marine ecosystem, yet the recovery of key fish populations to climate and anthropogenic disturbances requires further investigation. This study examines how…

Populations and Evolution · Quantitative Biology 2025-10-07 Matthew Hatton , Jack H Laverick , Neil Banas , Michael Heath

Bayesian methods are increasingly being applied to parameterize mechanistic process models used in environmental prediction and forecasting. In particular, models describing ecosystem dynamics with multiple states that are linear and…

Applications · Statistics 2021-10-19 John W. Smith , Leah R. Johnson , Robert Q. Thomas

Machine learning models used in medical applications often face challenges due to the covariate shift, which occurs when there are discrepancies between the distributions of training and target data. This can lead to decreased predictive…

Machine Learning · Computer Science 2024-12-24 Mingyang Cai , Thomas Klausch , Mark A. van de Wiel

Microbial ecosystems are remarkably diverse, stable, and often consist of a balanced mixture of core and peripheral species. Here we propose a conceptual model exhibiting all these emergent properties in quantitative agreement with real…

Populations and Evolution · Quantitative Biology 2018-04-18 Akshit Goyal , Sergei Maslov

Statistical multispecies models of multiarea marine ecosystems use a variety of data sources to estimate parameters using composite or weighted likelihood functions with associated weighting issues and questions on how to obtain variance…

Applications · Statistics 2012-02-16 Lorna Taylor , Verena M. Trenkel , Vojtech Kupca , Gunnar Stefansson

Species distribution models (SDM) are a key tool in ecology, conservation and management of natural resources. Two key components of the state-of-the-art SDMs are the description for species distribution response along environmental…

Methodology · Statistics 2021-11-08 Jarno Vanhatalo , Marcelo Hartmann , Lari Veneranta