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Molecular representation learning is pivotal for various molecular property prediction tasks related to drug discovery. Robust and accurate benchmarks are essential for refining and validating current methods. Existing molecular property…

Chemical Physics · Physics 2024-06-27 Shikun Feng , Jiaxin Zheng , Yinjun Jia , Yanwen Huang , Fengfeng Zhou , Wei-Ying Ma , Yanyan Lan

Contrastive learning has become pivotal in unsupervised representation learning, with frameworks like Momentum Contrast (MoCo) effectively utilizing large negative sample sets to extract discriminative features. However, traditional…

Machine Learning · Computer Science 2025-01-29 Duy Hoang , Huy Ngo , Khoi Pham , Tri Nguyen , Gia Bao , Huy Phan

We present Momentum Contrast (MoCo) for unsupervised visual representation learning. From a perspective on contrastive learning as dictionary look-up, we build a dynamic dictionary with a queue and a moving-averaged encoder. This enables…

Computer Vision and Pattern Recognition · Computer Science 2020-03-25 Kaiming He , Haoqi Fan , Yuxin Wu , Saining Xie , Ross Girshick

Molecular dynamics simulations provide theoretical insight into the microscopic behavior of materials in condensed phase and, as a predictive tool, enable computational design of new compounds. However, because of the large temporal and…

Chemical Physics · Physics 2020-06-18 Wujie Wang , Rafael Gómez-Bombarelli

Molecular representation learning methods typically tokenize molecules as individual atoms or use rigid, rule-based fragment decompositions, limiting their ability to capture meaningful chemical substructure context. We introduce…

Machine Learning · Computer Science 2026-05-26 Ankur Samanta , Rohan Gupta , Aditi Misra , Christian McIntosh Clarke , Jayakumar Rajadas

The scarcity of annotations poses a significant challenge in medical image analysis. Large-scale pre-training has emerged as a promising label-efficient solution, owing to the utilization of large-scale data, large models, and advanced…

Computer Vision and Pattern Recognition · Computer Science 2024-10-15 Linshan Wu , Jiaxin Zhuang , Hao Chen

Recent advances in representation learning have demonstrated an ability to represent information from different modalities such as video, text, and audio in a single high-level embedding vector. In this work we present a self-supervised…

Computer Vision and Pattern Recognition · Computer Science 2021-06-11 Alexander H. Liu , SouYoung Jin , Cheng-I Jeff Lai , Andrew Rouditchenko , Aude Oliva , James Glass

Multimodal semantic understanding often has to deal with uncertainty, which means the obtained messages tend to refer to multiple targets. Such uncertainty is problematic for our interpretation, including inter- and intra-modal uncertainty.…

Computer Vision and Pattern Recognition · Computer Science 2023-07-21 Yatai Ji , Junjie Wang , Yuan Gong , Lin Zhang , Yanru Zhu , Hongfa Wang , Jiaxing Zhang , Tetsuya Sakai , Yujiu Yang

Few-shot classification requires deep neural networks to learn generalized representations only from limited training images, which is challenging but significant in low-data regimes. Recently, CLIP-based methods have shown promising…

Computer Vision and Pattern Recognition · Computer Science 2022-11-08 Renrui Zhang , Bohao Li , Wei Zhang , Hao Dong , Hongsheng Li , Peng Gao , Yu Qiao

Real-world applications of machine learning models often confront data distribution shifts, wherein discrepancies exist between the training and test data distributions. In the common multi-domain multi-class setup, as the number of classes…

Computer Vision and Pattern Recognition · Computer Science 2024-05-24 Haoxiang Wang , Haozhe Si , Huajie Shao , Han Zhao

Molecular optimization is a key challenge in drug discovery and material science domain, involving the design of molecules with desired properties. Existing methods focus predominantly on single-property optimization, necessitating…

Machine Learning · Computer Science 2024-09-13 Aye Phyu Phyu Aung , Jay Chaudhary , Ji Wei Yoon , Senthilnath Jayavelu

Learning-based depth estimation has witnessed recent progress in multiple directions; from self-supervision using monocular video to supervised methods offering highest accuracy. Complementary to supervision, further boosts to performance…

Computer Vision and Pattern Recognition · Computer Science 2022-03-30 Yannick Verdié , Jifei Song , Barnabé Mas , Benjamin Busam , Aleš Leonardis , Steven McDonagh

We perform a comprehensive benchmarking of contrastive frameworks for learning multimodal representations in the medical domain. Through this study, we aim to answer the following research questions: (i) How transferable are general-domain…

Computer Vision and Pattern Recognition · Computer Science 2024-06-12 Shuvendu Roy , Yasaman Parhizkar , Franklin Ogidi , Vahid Reza Khazaie , Michael Colacci , Ali Etemad , Elham Dolatabadi , Arash Afkanpour

The high efficiency in computation and storage makes hashing (including binary hashing and quantization) a common strategy in large-scale retrieval systems. To alleviate the reliance on expensive annotations, unsupervised deep hashing…

Computer Vision and Pattern Recognition · Computer Science 2022-03-09 Jinpeng Wang , Ziyun Zeng , Bin Chen , Tao Dai , Shu-Tao Xia

Multi-modal learning has achieved remarkable success by integrating information from various modalities, achieving superior performance in tasks like recognition and retrieval compared to uni-modal approaches. However, real-world scenarios…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Xiaohao Liu , Xiaobo Xia , Zhuo Huang , See-Kiong Ng , Tat-Seng Chua

Morphological attributes from histopathological images and molecular profiles from genomic data are important information to drive diagnosis, prognosis, and therapy of cancers. By integrating these heterogeneous but complementary data, many…

Machine Learning · Computer Science 2022-02-28 Kaiwen Tan , Weixian Huang , Xiaofeng Liu , Jinlong Hu , Shoubin Dong

Artificial intelligence (AI) and machine learning (ML) are expanding in popularity for broad applications to challenging tasks in chemistry and materials science. Examples include the prediction of properties, the discovery of new reaction…

Multimodal pathological images are usually in clinical diagnosis, but computer vision-based multimodal image-assisted diagnosis faces challenges with modality fusion, especially in the absence of expert-annotated data. To achieve the…

Computer Vision and Pattern Recognition · Computer Science 2025-09-24 Qinghua Lin , Guang-Hai Liu , Zuoyong Li , Yang Li , Yuting Jiang , Xiang Wu

Olfaction -- how molecules are perceived as odors to humans -- remains poorly understood. Recently, the principal odor map (POM) was introduced to digitize the olfactory properties of single compounds. However, smells in real life are not…

Machine Learning · Computer Science 2025-01-28 Gary Tom , Cher Tian Ser , Ella M. Rajaonson , Stanley Lo , Hyun Suk Park , Brian K. Lee , Benjamin Sanchez-Lengeling

Recent masked image modeling (MIM) has received much attention in self-supervised learning (SSL), which requires the target model to recover the masked part of the input image. Although MIM-based pre-training methods achieve new…

Computer Vision and Pattern Recognition · Computer Science 2023-04-21 Qiang Zhou , Chaohui Yu , Hao Luo , Zhibin Wang , Hao Li