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A key question in evolution is how likely a mutant is to take over. This depends on natural selection and on stochastic fluctuations. Population spatial structure can impact mutant fixation probabilities. We introduce a model for structured…

Populations and Evolution · Quantitative Biology 2021-11-23 Loïc Marrec , Irene Lamberti , Anne-Florence Bitbol

We construct an individual-based metapopulation model of population genetics featuring migration, mutation, selection and genetic drift. In the case of a single `island', the model reduces to the Moran model. Using the diffusion…

Populations and Evolution · Quantitative Biology 2015-04-16 George W. A. Constable , Alan J. McKane

We consider a stochastic individual-based model of adaptive dynamics for an asexually reproducing population with mutation. Biologically motivated by the influence of seasons or the variation of drug concentration during medical treatment,…

Probability · Mathematics 2025-03-26 Manuel Esser , Anna Kraut

This paper investigates a nonlinear logistic model for age-structured population dynamics. The model incorporates interdependent fertility and mortality functions within a logistic framework, offering insights into stationary solutions and…

Analysis of PDEs · Mathematics 2025-11-24 Dragos-Patru Covei

We discuss the population dynamics with selection and random diffusion, keeping the total population constant, in a fitness landscape associated with Constraint Satisfaction, a paradigm for difficult optimization problems. We obtain a phase…

Populations and Evolution · Quantitative Biology 2016-11-23 Tommaso Brotto , Guy Bunin , Jorge Kurchan

Influence diagram is a graphical representation of belief networks with uncertainty. This article studies the structural properties of a probabilistic model in an influence diagram. In particular, structural controllability theorems and…

Artificial Intelligence · Computer Science 2013-03-25 Brian Y. Chan , Ross D. Shachter

Network representations are useful for describing the structure of a large variety of complex systems. Although most studies of real-world networks suppose that nodes are connected by only a single type of edge, most natural and engineered…

Physics and Society · Physics 2020-08-05 Rubén J. Sánchez-García , Emanuele Cozzo , Yamir Moreno

We survey known results about phase transitions in various models of statistical physics when the underlying space is a nonamenable graph. Most attention is devoted to transitive graphs and trees.

Probability · Mathematics 2009-10-31 Russell Lyons

Dynamical networks are powerful tools for modeling a broad range of complex systems, including financial markets, brains, and ecosystems. They encode how the basic elements (nodes) of these systems interact altogether (via links) and evolve…

Physics and Society · Physics 2019-03-13 Edward Laurence , Nicolas Doyon , Louis J Dubé , Patrick Desrosiers

Mathematical models of population extinction have a variety of applications in such areas as ecology, paleontology and conservation biology. Here we propose and investigate two types of sub-exponential models of population extinction.The…

Populations and Evolution · Quantitative Biology 2016-04-05 Georgy P. Karev , Irina G. Kareva

In this short communication, we shall explore a nonlinear discrete dynamical system that naturally occurs in population systems to describe a transmission of a trait from parents to their offspring. We consider a Mendelian inheritance for a…

Dynamical Systems · Mathematics 2013-04-23 Nasir Ganikhodjaev , Mansoor Saburov , Ashraf Mohamed Nawi

The transformer is a neural network component that can be used to learn useful representations of sequences or sets of data-points. The transformer has driven recent advances in natural language processing, computer vision, and…

Machine Learning · Computer Science 2026-01-21 Richard E. Turner

Dimension reduction is a common strategy to study non-linear dynamical systems composed by a large number of variables. The goal is to find a smaller version of the system whose time evolution is easier to predict while preserving some of…

Dynamical Systems · Mathematics 2022-06-23 Marina Vegué , Vincent Thibeault , Patrick Desrosiers , Antoine Allard

A broad class of systems, including ecological, epidemiological, and sociological ones, are characterized by populations of individuals assigned to specific categories, e.g., a chemical species, an opinion or an epidemic state, that are…

Statistical Mechanics · Physics 2025-07-17 Giorgio Vittorio Visco , Johannes Nauta , Tomas Scagliarini , Oriol Artime , Manlio De Domenico

Two-dimensional (2D) spectroscopy provides information about dissipative processes subsequent to electronic excitation, which play a functional role in energy harvesting materials and devices. This technique is particularly sensitive to…

Chemical Physics · Physics 2014-06-05 Joachim Seibt , Tonu Pullerits

We introduce a model for describing the dynamics of large numbers of interacting cells. The fundamental dynamical variables in the model are sub-cellular elements, which interact with each other through phenomenological intra- and…

Quantitative Methods · Quantitative Biology 2007-05-23 T. J. Newman

We consider the evolution of populations under the joint action of mutation and differential reproduction, or selection. The population is modelled as a finite-type Markov branching process in continuous time, and the associated…

Populations and Evolution · Quantitative Biology 2009-02-23 Ellen Baake , Hans-Otto Georgii

Many socio-economic and biological processes can be modeled as systems of interacting individuals. The behaviour of such systems can be often described within game-theoretic models. In these lecture notes, we introduce fundamental concepts…

Populations and Evolution · Quantitative Biology 2013-05-30 Jacek Miekisz

Several demographic and health indicators, including the total fertility rate (TFR) and modern contraceptive use rate (mCPR), evolve similarly over time, characterized by a transition between stable states. Existing approaches for…

Methodology · Statistics 2025-04-09 Herbert Susmann , Leontine Alkema

In this note we present two types of biological models which have interesting ergodic and chaotic properties. The first type are one-dimensional transformations, like a logistic map, which are used to describe the change in population size…

Dynamical Systems · Mathematics 2024-02-05 Ryszard Rudnicki