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The brain processes information about the environment via neural codes. The neural ideal was introduced recently as an algebraic object that can be used to better understand the combinatorial structure of neural codes. Every neural ideal…

Neurons and Cognition · Quantitative Biology 2018-04-24 Rebecca Garcia , Luis David García Puente , Ryan Kruse , Jessica Liu , Dane Miyata , Ethan Petersen , Kaitlyn Phillipson , Anne Shiu

A major area in neuroscience research is the study of how the brain processes spatial information. Neurons in the brain represent external stimuli via neural codes. These codes often arise from stereotyped stimulus-response maps,…

Neurons and Cognition · Quantitative Biology 2016-10-03 Ethan Petersen , Nora Youngs , Ryan Kruse , Dane Miyata , Rebecca Garcia , Luis David Garcia Puente

The "neural code" is the way the brain characterizes, stores, and processes information. Unraveling the neural code is a key goal of mathematical neuroscience. Topology, coding theory, and, recently, commutative algebra are some the…

Commutative Algebra · Mathematics 2017-06-28 Sema Gunturkun , Jack Jeffries , Jeffrey Sun

In this paper, we prove that every binomial ideal in a polynomial ring over an algebraically closed field of characteristic zero admits a canonical primary decomposition into binomial ideals. Moreover, we prove that this special…

Commutative Algebra · Mathematics 2010-05-10 Ignacio Ojeda

Neurons in the brain represent external stimuli via neural codes. These codes often arise from stereotyped stimulus-response maps, associating to each neuron a convex receptive field. An important problem confronted by the brain is to infer…

Neurons and Cognition · Quantitative Biology 2015-02-25 Carina Curto , Vladimir Itskov , Alan Veliz-Cuba , Nora Youngs

Neurons in the brain represent external stimuli via neural codes. These codes often arise from stimulus-response maps, associating to each neuron a convex receptive field. An important problem confronted by the brain is to infer properties…

Neurons and Cognition · Quantitative Biology 2014-09-10 Nora Youngs

We study the concept of canonical characteristic set of a characterizable differential ideal. We propose an efficient algorithm that transforms any characteristic set into the canonical one. We prove the basic properties of canonical…

Commutative Algebra · Mathematics 2009-02-25 Oleg Golubitsky , Marina Kondratieva , Alexey Ovchinnikov

Neural codes form an algebraic framework to study the nervous system, and understanding neural codes is a key goal of mathematical neuroscience. Neural rings and ideals are the tools connecting neuroscience and commutative algebra. In this…

Commutative Algebra · Mathematics 2025-11-25 Trung Chau

The neural ideal of a binary code $\mathbb{C} \subseteq \mathbb{F}_2^n$ is an ideal in $\mathbb{F}_2[x_1,\ldots, x_n]$ closely related to the vanishing ideal of $\mathbb{C}$. The neural ideal, first introduced by Curto et al, provides an…

Commutative Algebra · Mathematics 2019-08-26 R. Amzi Jeffs , Mohamed Omar , Nora Youngs

A neural code $\mathcal{C}$ is a collection of binary vectors of a given length n that record the co-firing patterns of a set of neurons. Our focus is on neural codes arising from place cells, neurons that respond to geographic stimulus. In…

Neurons and Cognition · Quantitative Biology 2016-07-05 Elizabeth Gross , Nida Kazi Obatake , Nora Youngs

This article introduces patterns of ideals of numerical semigroups, thereby unifying previous definitions of patterns of numerical semigroups. Several results of general interest are proved. More precisely, this article presents results on…

Rings and Algebras · Mathematics 2015-01-30 Klara Stokes

We determine, in a polynomial ring over a field, the arithmetical rank of certain ideals generated by a set of monomials and one binomial.

Commutative Algebra · Mathematics 2007-10-15 Margherita Barile

The neural rings and ideals as an algebraic tool for analyzing the intrinsic structure of neural codes were introduced by C.~Curto et al. in 2013. Since then they were investigated in several papers, including the 2017 paper by…

Commutative Algebra · Mathematics 2018-04-04 Katie Christensen , Hamid Kulosman

We characterize monomial ideals which are intersections of monomial prime ideals and study classes of ideals with this property, among them polymatroidal ideals.

Commutative Algebra · Mathematics 2013-10-15 Jürgen Herzog , Marius Vladoiu

An ideal on a set $X$ is a collection of subsets of $X$ closed under the operations of taking finite unions and subsets of its elements. Ideals are a very useful notion in topology and set theory and have been studied for a long time. We…

Logic · Mathematics 2019-02-26 Carlos Uzcategui

The aim of this work is to study duality of fractional ideals with respect to a fixed ideal and to investigate the relationship between value sets of pairs of dual ideals in admissible rings, a class of rings that contains the local rings…

Algebraic Geometry · Mathematics 2019-12-05 Abramo Hefez , Edison Marcavillaca Niño de Guzmán

We investigate the structure of ideals generated by binomials (polynomials with at most two terms) and the schemes and varieties associated to them. The class of binomial ideals contains many classical examples from algebraic geometry, and…

alg-geom · Mathematics 2008-02-03 David Eisenbud , Bernd Sturmfels

Given a monomial ideal in a polynomial ring over a field, we define the generalized Newton complementary dual of the given ideal. We show good properties of such duals including linear quotients and isomorphisms between the special fiber…

Commutative Algebra · Mathematics 2019-11-21 Katie Ansaldi , Kuei-Nuan Lin , Yi-Huang Shen

Binomial ideals are special polynomial ideals with many algorithmically and theoretically nice properties. We discuss the problem of deciding if a given polynomial ideal is binomial. While the methods are general, our main motivation and…

Combinatorics · Mathematics 2015-09-11 Carsten Conradi , Thomas Kahle

In this article we investigate when a homogeneous ideal in a graded ring is normal, that is, when all positive powers of the ideal are integrally closed. We are particularly interested in homogeneous ideals in an N-graded ring generated by…

Commutative Algebra · Mathematics 2007-05-23 Les Reid , Leslie G. Roberts , Marie A. Vitulli
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