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Learning about the relationship between distance to landmarks and events and phenomena of interest is a multi-faceted problem, as it may require taking into account multiple dimensions, including: spatial position of landmarks, timing of…

Applications · Statistics 2024-09-11 Ines Levin

We consider a branching random walk on a $d$-ary tree of height $n$ ($n \in \mathbb{N}$), under the presence of a hard wall which restricts each value to be positive, where $d$ is a natural number satisfying $d\geqslant2$. The question of…

Probability · Mathematics 2024-02-23 Rishideep Roy

Inspired by DNA data of the human cytomegalovirus we propose a model of a two-type parasite population distributed over its hosts. The parasite is capable to persist in its host till the host dies, and to reinfect other hosts. To maintain…

Probability · Mathematics 2019-01-15 Cornelia Pokalyuk , Anton Wakolbinger

In a recent paper on 'Estimating Species Trees from Unrooted Gene Trees' Liu and Yu observe that the distance matrix on the underlying taxon set, which is built up from expected internode distances on gene trees under the multispecies…

Populations and Evolution · Quantitative Biology 2011-08-26 Martin Kreidl

The constant rate birth--death process is a popular null model for speciation and extinction. If one removes extinct and non-sampled lineages, this process induces `reconstructed trees' which describe the relationship between extant…

Probability · Mathematics 2011-08-01 Tanja Stadler , Mike Steel

Habitat loss is one of the biggest threats facing plant species nowadays. We formulate a simple mathematical model of seed dispersal on reduced habitats to discuss survival of the species in relation to the habitat size and seeds production…

Probability · Mathematics 2023-05-24 Cristian F. Coletti , Nevena Marić , Pablo M. Rodriguez

This paper investigates the competition of two species in a heterogeneous environment subject to the effect of harvesting. The most realistic harvesting case is connected with the intrinsic growth rate, and the harvesting functions are…

A lot of research activity has recently taken place around the chase procedure, due to its usefulness in data integration, data exchange, query optimization, peer data exchange and data correspondence, to mention a few. As the chase has…

Databases · Computer Science 2013-03-28 Gosta Grahne , Adrian Onet

We establish maximal trees and graphs for the difference of average distance and proximity proving thus the corresponding conjecture posed in [4]. We also establish maximal trees for the difference of average eccentricity and remoteness and…

Combinatorics · Mathematics 2020-10-22 Jelena Sedlar

An organism that is newly introduced into an existing population has a survival probability that is dependent on both the population density of its environment and the competition it experiences with the members of that population.…

Populations and Evolution · Quantitative Biology 2024-12-17 Jason M. Gray , Rowan J. Barker-Clarke , Jacob G. Scott , Michael Hinczewski

We consider families of discrete time birth and death chains on trees, and show that in presence of a drift towards the root of the tree, the chains exhibit cut-off behavior along the drift and escape behavior in the opposite direction.

Probability · Mathematics 2011-02-11 Olivier Bertoncini

Phylogenetic reconciliation seeks to explain host-symbiont co-evolution by mapping parasite trees onto host trees through events such as cospeciation, duplication, host switching, and loss. Finding an optimal reconciliation that ensures…

Populations and Evolution · Quantitative Biology 2026-02-02 Cyriac Antony , Alessio Martino , Blerina Sinaimeri

A swarm of preys when attacked by a predator is known to rely on their cooperative interactions to escape. Understanding such interactions of collectively moving preys and the emerging patterns of their escape trajectories still remain…

Biological Physics · Physics 2019-10-25 Dipanjan Chakraborty , Sanchayan Bhunia , Rumi De

We consider a random walk with death in $[-N,N]$ moving in a time dependent environment. The environment is a system of particles which describes a current flux from $N$ to $-N$. Its evolution is influenced by the presence of the random…

Probability · Mathematics 2015-07-29 Anna De Masi , Errico Presutti , Dimitrios Tsagkarogiannis , Maria Eulalia Vares

We consider a population structured by a space variable and a phenotypical trait, submitted to dispersion, mutations, growth and nonlocal competition. This population is facing an environmental gradient: the optimal trait for survival…

Analysis of PDEs · Mathematics 2019-10-14 Gwenaël Peltier

We consider the dynamics of a population spatially structured in colonies that are vulnerable to catastrophic events occurring at random times, which randomly reduce their population size and compel survivors to disperse to neighboring…

Probability · Mathematics 2024-07-23 Valdivino V. Junior , Fábio P. Machado , Alejandro Roldán-Correa

We prove the Erd\H os--S\'os conjecture for trees with bounded maximum degree and large dense host graphs. As a corollary, we obtain an upper bound on the multicolour Ramsey number of large trees whose maximum degree is bounded by a…

Combinatorics · Mathematics 2020-08-13 Guido Besomi , Matías Pavez-Signé , Maya Stein

We present a spatial, individual-based predator-prey model in which dispersal is dependent on the local community. We determine species suitability to the biotic conditions of their local environment through a time and space varying fitness…

Populations and Evolution · Quantitative Biology 2008-07-21 Elise Filotas , Martin Grant , Lael Parrott , Per Arne Rikvold

Phylogenetic networks which are, as opposed to trees, suitable to describe processes like hybridization and horizontal gene transfer, play a substantial role in evolutionary research. However, while non-treelike events need to be taken into…

Populations and Evolution · Quantitative Biology 2022-07-06 Mareike Fischer , Tom Niklas Hamann , Kristina Wicke

In this paper, we study the independence of shifts defined on $\mathbb{N}^d$ ($\mathbb{N}^d$ shift) and trees (tree-shift). Firstly, for the completeness of the article, we provide a proof that an $\mathbb{N}^d$ shift has positive…

Dynamical Systems · Mathematics 2024-12-03 Jung-Chao Ban , Guan-Yu Lai
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