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Image segmentation plays an essential role in medicine for both diagnostic and interventional tasks. Segmentation approaches are either manual, semi-automated or fully-automated. Manual segmentation offers full control over the quality of…

Computer Vision and Pattern Recognition · Computer Science 2019-03-21 Tomas Sakinis , Fausto Milletari , Holger Roth , Panagiotis Korfiatis , Petro Kostandy , Kenneth Philbrick , Zeynettin Akkus , Ziyue Xu , Daguang Xu , Bradley J. Erickson

Despite recent progress of automatic medical image segmentation techniques, fully automatic results usually fail to meet the clinical use and typically require further refinement. In this work, we propose a quality-aware memory network for…

Computer Vision and Pattern Recognition · Computer Science 2021-07-06 Tianfei Zhou , Liulei Li , Gustav Bredell , Jianwu Li , Ender Konukoglu

Precise identification of spinal nerve rootlets is relevant to delineate spinal levels for the study of functional activity in the spinal cord. The goal of this study was to develop an automatic method for the semantic segmentation of…

Computer Vision and Pattern Recognition · Computer Science 2024-07-26 Jan Valosek , Theo Mathieu , Raphaelle Schlienger , Olivia S. Kowalczyk , Julien Cohen-Adad

Brain lesion segmentation plays an essential role in neurological research and diagnosis. As brain lesions can be caused by various pathological alterations, different types of brain lesions tend to manifest with different characteristics…

Image and Video Processing · Electrical Eng. & Systems 2024-07-17 Xinru Zhang , Ni Ou , Berke Doga Basaran , Marco Visentin , Mengyun Qiao , Renyang Gu , Cheng Ouyang , Yaou Liu , Paul M. Matthew , Chuyang Ye , Wenjia Bai

Purpose: To compare the segmentation and detection performance of a deep learning model trained on a database of human-labelled clinical diffusion-weighted (DW) stroke lesions to a model trained on the same database enhanced with synthetic…

Three-dimensional (3D) integrated renal structures (IRS) segmentation is important in clinical practice. With the advancement of deep learning techniques, many powerful frameworks focusing on medical image segmentation are proposed. In this…

Image and Video Processing · Electrical Eng. & Systems 2022-09-08 Kangqing Ye , Peng Liu , Xiaoyang Zou , Qin Zhou , Guoyan Zheng

Magnetic resonance imaging (MRI) is an effective imaging modality for identifying and localizing breast lesions in women. Accurate and precise lesion segmentation using a computer-aided-diagnosis (CAD) system, is a crucial step in…

Computer Vision and Pattern Recognition · Computer Science 2017-12-15 Sulaiman Vesal , Andres Diaz-Pinto , Nishant Ravikumar , Stephan Ellmann , Amirabbas Davari , Andreas Maier

Semantic segmentation neural networks require pixel-level annotations in large quantities to achieve a good performance. In the medical domain, such annotations are expensive, because they are time-consuming and require expert knowledge.…

Computer Vision and Pattern Recognition · Computer Science 2024-10-28 Grzegorz Chlebus , Andrea Schenk , Horst K. Hahn , Bram van Ginneken , Hans Meine

Integrating high-level semantically correlated contents and low-level anatomical features is of central importance in medical image segmentation. Towards this end, recent deep learning-based medical segmentation methods have shown great…

Computer Vision and Pattern Recognition · Computer Science 2023-07-19 Chenyu You , Weicheng Dai , Yifei Min , Lawrence Staib , James S. Duncan

Automatic evaluation of myocardium and pathology plays an important role in the quantitative analysis of patients suffering from myocardial infarction. In this paper, we present a cascaded convolutional neural network framework for…

Image and Video Processing · Electrical Eng. & Systems 2021-01-01 Jun Ma

Vertebral labelling and segmentation are two fundamental tasks in an automated spine processing pipeline. Reliable and accurate processing of spine images is expected to benefit clinical decision-support systems for diagnosis, surgery…

Performance measures are an important tool for assessing and comparing different medical image segmentation algorithms. Unfortunately, the current measures have their weaknesses when it comes to assessing certain edge cases. These…

Computer Vision and Pattern Recognition · Computer Science 2022-10-26 Dennis Hartmann , Verena Schmid , Philip Meyer , Iñaki Soto-Rey , Dominik Müller , Frank Kramer

Objectives: To present a publicly available deep learning-based torso segmentation model that provides comprehensive voxel-wise coverage, including delineations that extend to the boundaries of anatomical compartments. Materials and…

Treatment of acute ischemic strokes (AIS) is largely contingent upon the time since stroke onset (TSS). However, TSS may not be readily available in up to 25% of patients with unwitnessed AIS. Current clinical guidelines for patients with…

Image and Video Processing · Electrical Eng. & Systems 2021-05-03 Haoyue Zhang , Jennifer S Polson , Kambiz Nael , Noriko Salamon , Bryan Yoo , Suzie El-Saden , Fabien Scalzo , William Speier , Corey W Arnold

The main objective of this project is to segment different breast ultrasound images to find out lesion area by discarding the low contrast regions as well as the inherent speckle noise. The proposed method consists of three stages (removing…

Computer Vision and Pattern Recognition · Computer Science 2016-09-28 Ibrahim Sadek , Mohamed Elawady , Viktor Stefanovski

Segment Anything Model (SAM), a vision foundation model trained on large-scale annotations, has recently continued raising awareness within medical image segmentation. Despite the impressive capabilities of SAM on natural scenes, it…

Image and Video Processing · Electrical Eng. & Systems 2023-11-15 Yinuo Wang , Kai Chen , Weimin Yuan , Cai Meng , XiangZhi Bai

Automatic parsing of human anatomies at the instance-level from 3D computed tomography (CT) is a prerequisite step for many clinical applications. The presence of pathologies, broken structures or limited field-of-view (FOV) can all make…

Computer Vision and Pattern Recognition · Computer Science 2024-12-23 Heng Guo , Jianfeng Zhang , Ke Yan , Le Lu , Minfeng Xu

With the introduction of fully convolutional neural networks, deep learning has raised the benchmark for medical image segmentation on both speed and accuracy, and different networks have been proposed for 2D and 3D segmentation with…

Computer Vision and Pattern Recognition · Computer Science 2018-09-26 Ken C. L. Wong , Mehdi Moradi , Hui Tang , Tanveer Syeda-Mahmood

We introduce 3D-SIS, a novel neural network architecture for 3D semantic instance segmentation in commodity RGB-D scans. The core idea of our method is to jointly learn from both geometric and color signal, thus enabling accurate instance…

Computer Vision and Pattern Recognition · Computer Science 2019-04-30 Ji Hou , Angela Dai , Matthias Nießner

At present, the majority of the proposed Deep Learning (DL) methods provide point predictions without quantifying the models uncertainty. However, a quantification of the reliability of automated image analysis is essential, in particular…

Image and Video Processing · Electrical Eng. & Systems 2020-08-17 Lisa Herzog , Elvis Murina , Oliver Dürr , Susanne Wegener , Beate Sick