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Understanding the optimization dynamics of neural networks is necessary for closing the gap between theory and practice. Stochastic first-order optimization algorithms are known to efficiently locate favorable minima in deep neural…

Machine Learning · Computer Science 2023-06-22 Charles Guille-Escuret , Hiroki Naganuma , Kilian Fatras , Ioannis Mitliagkas

Understanding the dynamics of neural network parameters during training is one of the key challenges in building a theoretical foundation for deep learning. A central obstacle is that the motion of a network in high-dimensional parameter…

Machine Learning · Computer Science 2021-03-30 Daniel Kunin , Javier Sagastuy-Brena , Surya Ganguli , Daniel L. K. Yamins , Hidenori Tanaka

The neural manifold hypothesis postulates that the activity of a neural population forms a low-dimensional manifold whose structure reflects that of the encoded task variables. In this work, we combine topological deep generative models and…

Neurons and Cognition · Quantitative Biology 2023-04-26 Francisco Acosta , Sophia Sanborn , Khanh Dao Duc , Manu Madhav , Nina Miolane

The remarkable performance of convolutional neural networks (CNNs) is entangled with their huge number of uninterpretable parameters, which has become the bottleneck limiting the exploitation of their full potential. Towards network…

Computer Vision and Pattern Recognition · Computer Science 2020-08-26 Yuchao Li , Rongrong Ji , Shaohui Lin , Baochang Zhang , Chenqian Yan , Yongjian Wu , Feiyue Huang , Ling Shao

The subject of deep learning has recently attracted users of machine learning from various disciplines, including: medical diagnosis and bioinformatics, financial market analysis and online advertisement, speech and handwriting recognition,…

Machine Learning · Computer Science 2018-03-12 Charles K. Chui , Shao-Bo Lin , Ding-Xuan Zhou

Simulations of complex physical systems are typically realized by discretizing partial differential equations (PDEs) on unstructured meshes. While neural networks have recently been explored for surrogate and reduced order modeling of PDE…

Machine Learning · Computer Science 2021-10-27 Jiayang Xu , Aniruddhe Pradhan , Karthik Duraisamy

Neural networks often struggle with high-dimensional but small sample-size tabular datasets. One reason is that current weight initialisation methods assume independence between weights, which can be problematic when there are insufficient…

Machine Learning · Computer Science 2024-08-20 Andrei Margeloiu , Nikola Simidjievski , Pietro Lio , Mateja Jamnik

Neural networks that process the parameters of other neural networks find applications in domains as diverse as classifying implicit neural representations, generating neural network weights, and predicting generalization errors. However,…

"Deep Learning"/"Deep Neural Nets" is a technological marvel that is now increasingly deployed at the cutting-edge of artificial intelligence tasks. This dramatic success of deep learning in the last few years has been hinged on an enormous…

Machine Learning · Computer Science 2021-04-30 Anirbit Mukherjee

We consider the optimization of a neural network previously developed by the authors for the joint inversion of 3D gravitational and magnetic fields in the context of mineral exploration. The distinctive feature of this neural network is…

Continuous attractor networks (CANs) are widely used to model how the brain temporarily retains continuous behavioural variables via persistent recurrent activity, such as an animal's position in an environment. However, this memory…

Neural and Evolutionary Computing · Computer Science 2025-07-02 Madison Cotteret , Christopher J. Kymn , Hugh Greatorex , Martin Ziegler , Elisabetta Chicca , Friedrich T. Sommer

Threshold activation functions are highly preferable in neural networks due to their efficiency in hardware implementations. Moreover, their mode of operation is more interpretable and resembles that of biological neurons. However,…

Machine Learning · Computer Science 2023-03-07 Tolga Ergen , Halil Ibrahim Gulluk , Jonathan Lacotte , Mert Pilanci

This work investigates different sufficient and necessary criteria for hyperelastic, isotropic polyconvex material models, focusing on neural network implementations for compressible and incompressible materials. Furthermore, the…

Computational Engineering, Finance, and Science · Computer Science 2026-04-14 Gian-Luca Geuken , Patrick Kurzeja , David Wiedemann , Martin Zlatić , Marko Čanađija , Jörn Mosler

Given a 3D surface defined by an elevation function on a 2D grid as well as non-spatial features observed at each pixel, the problem of surface segmentation aims to classify pixels into contiguous classes based on both non-spatial features…

Computer Vision and Pattern Recognition · Computer Science 2020-08-27 Wenchong He , Arpan Man Sainju , Zhe Jiang , Da Yan

Prediction of protein-ligand complexes for flexible proteins remains still a challenging problem in computational structural biology and drug design. Here we present two novel deep neural network approaches with significant improvement in…

Biomolecules · Quantitative Biology 2020-08-28 Amr H. Mahmoud , Jonas F. Lill , Markus A. Lill

We propose a framework for constructing combinatorial complexes (CCs) from fMRI time series data that captures both pairwise and higher-order neural interactions through information-theoretic measures, bridging topological deep learning and…

Neurons and Cognition · Quantitative Biology 2026-01-06 Valentina Sánchez , Çiçek Güven , Koen Haak , Theodore Papamarkou , Gonzalo Nápoles , Marie Šafář Postma

Molecules have various computational representations, including numerical descriptors, strings, graphs, point clouds, and surfaces. Each representation method enables the application of various machine learning methodologies from linear…

Machine Learning · Computer Science 2025-02-18 Jirka Lhotka , Daniel Probst

Due to the diverse sparsity, high dimensionality, and large temporal variation of dynamic point clouds, it remains a challenge to design an efficient point cloud compression method. We propose to code the geometry of a given point cloud by…

Computer Vision and Pattern Recognition · Computer Science 2022-12-13 Yueyu Hu , Yao Wang

Wider adoption of neural networks in many critical domains such as finance and healthcare is being hindered by the need to explain their predictions and to impose additional constraints on them. Monotonicity constraint is one of the most…

Machine Learning · Computer Science 2023-06-02 Davor Runje , Sharath M. Shankaranarayana

When three-dimensional bodies contain thin features, non-trivial topology, or scan-derived surfaces, volumetric meshing can become the dominant bottleneck in simulation workflows. We replace this step with a learned geometric…

Computational Physics · Physics 2026-04-02 WaiChing Sun
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