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Clustering high-dimensional datasets is hard because interpoint distances become less informative in high-dimensional spaces. We present a clustering algorithm that performs nonlinear dimensionality reduction and clustering jointly. The…

Machine Learning · Computer Science 2018-03-06 Sohil Atul Shah , Vladlen Koltun

Multidimensional scaling (MDS) is a dimensionality reduction technique for microbial ecology data analysis that represents the multivariate structure while preserving pairwise distances between samples. While its improvement has enhanced…

In high-dimension, low-sample size (HDLSS) data, it is not always true that closeness of two objects reflects a hidden cluster structure. We point out the important fact that it is not the closeness, but the "values" of distance that…

Machine Learning · Statistics 2013-12-30 Yoshikazu Terada

Image datasets have been steadily growing in size, harming the feasibility and efficiency of large-scale 3D reconstruction methods. In this paper, a novel approach for scaling Multi-View Stereo (MVS) algorithms up to arbitrarily large…

Computer Vision and Pattern Recognition · Computer Science 2022-07-19 Marco Orsingher , Paolo Zani , Paolo Medici , Massimo Bertozzi

Scientists in many fields have the common and basic need of dimensionality reduction: visualizing the underlying structure of the massive multivariate data in a low-dimensional space. However, many dimensionality reduction methods confront…

Machine Learning · Statistics 2015-03-19 Teng Qiu , Yongjie Li

Multidimensional scaling (MDS) is a popular technique for mapping a finite metric space into a low-dimensional Euclidean space in a way that best preserves pairwise distances. We study a notion of MDS on infinite metric measure spaces,…

Statistics Theory · Mathematics 2019-04-17 Lara Kassab

Clustering procedures suitable for the analysis of very high-dimensional data are needed for many modern data sets. In model-based clustering, a method called high-dimensional data clustering (HDDC) uses a family of Gaussian mixture models…

Methodology · Statistics 2017-06-28 Angelina Pesevski , Brian C. Franczak , Paul D. McNicholas

Multidimensional Scaling (MDS) is a classical technique for embedding data in low dimensions, still in widespread use today. Originally introduced in the 1950's, MDS was not designed with high-dimensional data in mind; while it remains…

Statistics Theory · Mathematics 2018-02-01 Erez Peterfreund , Matan Gavish

A hierarchical scheme for clustering data is presented which applies to spaces with a high number of dimension ($N_{_{D}}>3$). The data set is first reduced to a smaller set of partitions (multi-dimensional bins). Multiple clustering…

Data Analysis, Statistics and Probability · Physics 2017-10-16 Kevin McIlhany , Stephen Wiggins

When visualizing a high-dimensional dataset, dimension reduction techniques are commonly employed which provide a single 2-dimensional view of the data. We describe ENS-t-SNE: an algorithm for Embedding Neighborhoods Simultaneously that…

Machine Learning · Computer Science 2024-04-02 Jacob Miller , Vahan Huroyan , Raymundo Navarrete , Md Iqbal Hossain , Stephen Kobourov

Developing an understanding of high-dimensional data can be facilitated by visualizing that data using dimensionality reduction. However, the low-dimensional embeddings are often difficult to interpret. To facilitate the exploration and…

Machine Learning · Computer Science 2025-04-16 Fuyin Lai , Edith Heiter , Guillaume Bied , Jefrey Lijffijt

Interactive visualization of embedding projections is a useful technique for understanding data and evaluating machine learning models. Labeling data within these visualizations is critical for interpretation, as labels provide an overview…

Human-Computer Interaction · Computer Science 2025-05-20 Donghao Ren , Fred Hohman , Dominik Moritz

Multidimensional scaling (MDS) is a popular technique for mapping a finite metric space into a low-dimensional Euclidean space in a way that best preserves pairwise distances. We overview the theory of classical MDS, along with its…

Statistics Theory · Mathematics 2020-07-14 Henry Adams , Mark Blumstein , Lara Kassab

We provide a rigorous mathematical treatment to the crowding issue in data visualization when high dimensional data sets are projected down to low dimensions for visualization. By properly adjusting the capacity of high dimensional balls,…

Machine Learning · Computer Science 2021-06-02 Rongrong Wang , Xiaopeng Zhang

We present Clusterplot, a multi-class high-dimensional data visualization tool designed to visualize cluster-level information offering an intuitive understanding of the cluster inter-relations. Our unique plots leverage 2D blobs devised to…

Graphics · Computer Science 2021-03-05 Or Malkai , Min Lu , Daniel Cohen-Or

This paper addresses the problem of mapping high-dimensional data to a low-dimensional space, in the presence of other known features. This problem is ubiquitous in science and engineering as there are often controllable/measurable features…

Machine Learning · Statistics 2024-01-01 Anh Tuan Bui

Classical metric and non-metric multidimensional scaling (MDS) variants are widely known manifold learning (ML) methods which enable construction of low dimensional representation (projections) of high dimensional data inputs. However,…

Data Analysis, Statistics and Probability · Physics 2014-06-16 Denis Horvath , Jozef Ulicny , Branislav Brutovsky

Interactive exploration of large, multidimensional datasets plays a very important role in various scientific fields. It makes it possible not only to identify important structural features and forms, such as clusters of vertices and their…

Machine Learning · Computer Science 2023-03-10 Bartosz Minch

Clustering analysis has received considerable attention in spatial data mining for several years. With the rapid development of the geospatial information technologies, the size of spatial information data is growing exponentially which…

Distributed, Parallel, and Cluster Computing · Computer Science 2016-08-25 Xia Yue , Wang Man , Jun Yue , Guangcao Liu

Dimensionality reduction techniques are widely used for visualizing high-dimensional data in two dimensions. Existing methods are typically designed to preserve either local (e.g., $t$-SNE, UMAP) or global (e.g., MDS, PCA) structure of the…

Machine Learning · Computer Science 2026-02-02 Noël Kury , Dmitry Kobak , Sebastian Damrich