English
Related papers

Related papers: Persistent topology of the reionization bubble net…

200 papers

Persistent homology is a powerful mathematical tool that summarizes useful information about the shape of data allowing one to detect persistent topological features while one adjusts the resolution. However, the computation of such…

Quantum Physics · Physics 2022-03-01 Bernardo Ameneyro , Vasileios Maroulas , George Siopsis

We introduce topological methods for quantifying spatially heterogeneous dynamics, and use these tools to analyze particle-tracking data for a quasi-two-dimensional granular system of air-fluidized beads on approach to jamming. In…

Soft Condensed Matter · Physics 2007-08-30 A. R. Abate , D. J. Durian

In this paper we develop a novel Topological Data Analysis (TDA) approach for studying graph representations of time series of dynamical systems. Specifically, we show how persistent homology, a tool from TDA, can be used to yield a…

Chaotic Dynamics · Physics 2020-01-28 Audun Myers , Elizabeth Munch , Firas A. Khasawneh

In recent years there has been noticeable interest in the study of the "shape of data". Among the many ways a "shape" could be defined, topology is the most general one, as it describes an object in terms of its connectivity structure:…

Machine Learning · Statistics 2017-09-22 Tullia Padellini , Pierpaolo Brutti

Hyperuniformity, the suppression of density fluctuations at large length scales, is observed across a wide variety of domains, from cosmology to condensed matter and biological systems. Although the standard definition of hyperuniformity…

Statistical Mechanics · Physics 2024-05-07 Marco Salvalaglio , Dominic J. Skinner , Jörn Dunkel , Axel Voigt

Persistent homology has been studied to better understand the structural properties and topology features of weighted networks. It can reveal hidden layers of information about the higher-order structures formed by non-pairwise interactions…

Combinatorics · Mathematics 2025-06-25 Udit Raj , Slobodan Maletić , Sudeepto Bhattacharya

We study the grokking phenomenon through the lens of topology. Using persistent homology on point clouds derived from the embedding matrices of a range of models trained on modular arithmetic with varying primes, we identify a clear and…

Machine Learning · Computer Science 2026-05-08 Yifan Tang , Qiquan Wang , Inés García-Redondo , Anthea Monod

We present a topology-informed approach for classifying particle jets using persistent homology, a framework that captures the structural properties of point clouds. Particle jets produced in proton-proton collisions consist of cascades of…

High Energy Physics - Phenomenology · Physics 2026-01-06 Saurav Mittal

Turing patterns, arising from the interplay between competing species of diffusive particles, has long been an important concept for describing non-equilibrium self-organization in nature, and has been extensively investigated in many…

Pattern Formation and Solitons · Physics 2023-06-26 Jasper van der Kolk , Guillermo García-Pérez , Nikos E. Kouvaris , M. Ángeles Serrano , Marián Boguñá

Features such as photon rings, jets, or hot. spots can leave particular topological signatures in a black hole image. As such, topological data analysis can be used to characterize images resulting from high resolution observations…

High Energy Astrophysical Phenomena · Physics 2022-10-11 Pierre Christian , Chi-kwan Chan , Anthony Hsu , Feryal Ozel , Dimitrios Psaltis , Iniyan Natarajan

We develop an analysis pipeline for characterizing the topology of large scale structure and extracting cosmological constraints based on persistent homology. Persistent homology is a technique from topological data analysis that quantifies…

Cosmology and Nongalactic Astrophysics · Physics 2021-06-14 Matteo Biagetti , Alex Cole , Gary Shiu

By dividing potential energy landscapes into basins of attractions surrounding minima and linking those basins that are connected by transition state valleys, a network description of energy landscapes naturally arises. These networks are…

Statistical Mechanics · Physics 2007-05-23 Jonathan P. K. Doye , Claire P. Massen

Persistent homology is a popular computational tool for analyzing the topology of point clouds, such as the presence of loops or voids. However, many real-world datasets with low intrinsic dimensionality reside in an ambient space of much…

Machine Learning · Computer Science 2024-11-01 Sebastian Damrich , Philipp Berens , Dmitry Kobak

We investigate the large-scale structure and temporal evolution of cyclonic and anticyclonic systems in the North Atlantic using persistent homology applied to daily sea-level pressure anomalies from the ERA5 reanalysis (1950-2022). By…

Atmospheric and Oceanic Physics · Physics 2025-11-26 Himanshu Yadav , Gisela D. Charó , Davide Faranda

A variety of observations now indicate that intergalactic helium was fully ionized by z~3. The most recent measurements of the high-redshift quasar luminosity function imply that these sources had produced ~2.5 ionizing photons per helium…

Astrophysics · Physics 2009-11-13 Steven Furlanetto , S. Peng Oh

The unsteady motion of a gas-liquid interface, such as during splashing or atomization, often results in complex liquid structures embedded in the ambient fluid. Here we explore the use of skeletonization to identify the minimum amount of…

Fluid Dynamics · Physics 2022-09-28 Xianyang Chen , Jiacai Lu , Stéphane Zaleski , Grétar Tryggvason

We introduce a holographic framework for analyzing the steady states of repeated quantum channels with strong symmetries. Using channel-state duality, we show that the steady state of a $d$-dimensional quantum channel is holographically…

Quantum Physics · Physics 2025-11-26 Tsung-Cheng Lu , Yu-Jie Liu , Sarang Gopalakrishnan , Yizhi You

Persistent Topology studies topological features of shapes by analyzing the lower level sets of suitable functions, called filtering functions, and encoding the arising information in a parameterized version of the Betti numbers, i.e. the…

Algebraic Topology · Mathematics 2010-05-05 Andrea Cerri , Patrizio Frosini

We apply persistent homology to the ORBIS Geospatial Network Model of the Roman World in order to quantify the structural resilience of the Eastern Mediterranean trade network between 0 and 400 ce. The network is represented as a weighted…

Physics and Society · Physics 2026-05-27 Jose de Jesus Bernal Alvarado , David Delepine , Carlos Pinedo Guadarrama

Recently, there has been a great deal of interest in understanding the reionization of hydrogen in the intergalactic medium (IGM). One of the major outstanding questions is how this event proceeds on large scales. Motivated by numerical…

Astrophysics · Physics 2009-11-10 Steven Furlanetto , Matias Zaldarriaga , Lars Hernquist