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In recent years, studies have demonstrated that the grain boundary (GB) migration is a three-dimensional (3D) process, characterized by a 3D mobility tensor. In this study, we develop a 3D interface random walk theory to extract the GB…

Materials Science · Physics 2025-02-26 Xinyuan Song , Chuang Deng

In GO/MoSe2 semiconductor heterostructure, we have demonstrated a subtle control on the doping dynamics by modulating interlayer coupling through the combination of strain-reducing relative rotation of the constituting layers and variation…

Transport of ions and small molecules across the cell membrane against electrochemical gradients is catalyzed by integral membrane proteins that use a source of free energy to drive the energetically uphill flux of the transported…

Biomolecules · Quantitative Biology 2022-03-25 Oliver Beckstein , Fiona Naughton

We investigate quantum transport of electrons, phase solitons, etc. through mesoscopic networks of zero-dimensional quantum dots. Straight and circular ladders are chosen as networks with each coupled with three semi-infinite leads (with…

Mesoscale and Nanoscale Physics · Physics 2015-05-14 K. Nakamura , D. Matrasulov , G. Milibaeva , J. Yusupov , U. Salomov , T. Ohta , M. Miyamoto

Intracellular transport of large cargoes, such as organelles, vesicles or large proteins, is a complex dynamical process that involves the interplay of ATP-consuming molecular motors, cytoskeleton filaments and the viscoelastic cytoplasm.…

Biological Physics · Physics 2013-05-29 L. Bruno , V. Levi , M. Brunstein , M. A. Despósito

Nuclear pore complexes are constantly confronted by large fluxes of macromolecules and macromolecular complexes that need to get into and out of the nucleus. Such bi-directional traffic occurring in a narrow channel can easily lead to…

Biological Physics · Physics 2008-07-22 Ruti Kapon , Alon Topchik , David Mukamel , and Ziv Reich

Transport of molecular motors along protein filaments in a half-closed geometry is a common feature of biologically relevant processes in cellular protrusions. Using a lattice gas model we study how the interplay between active and…

Biological Physics · Physics 2017-03-30 Isabella R. Graf , Erwin Frey

Navigation of microorganisms is controlled by internal processes ultimately sensitive to mechanical or chemical signaling encountered along the path. In many natural environments, such as porous soils or physiological ducts, motile species…

Plasma membrane tubes are ubiquitous in cellular membranes and in the membranes of intracellular organelles. They play crucial roles in trafficking, ion transport, and cellular motility. The formation of plasma membrane tubes can be due to…

Soft Condensed Matter · Physics 2022-06-09 Arijit Mahapatra , Padmini Rangamani

Grain boundary (GB) migration plays a crucial role in the thermal and mechanical responses of polycrystalline materials, particularly in ultrafine-grained and nano-grained materials exhibiting grain size-dependent properties. This study…

Materials Science · Physics 2024-04-08 Liang Yang , Xinyuan Song , Tingting Yu , Dahai Liu , Chuang Deng

The lateral diffusion of lipids within membrane is of paramount importance, serving as a central mechanism in numerous physiological processes including cell signaling, membrane trafficking, protein activity regulation, and energy…

Soft Condensed Matter · Physics 2024-07-09 V. K. Sharma , H. Srinivasan , J. Gupta , S. Mitra

Nonequilibrium dynamics of biomembranes with active inclusions is considered. The inclusions represent protein molecules which perform cyclic internal conformational motions driven by the energy brought with ATP ligands. As protein…

Soft Condensed Matter · Physics 2015-05-13 Hsuan-Yi Chen , Alexander S. Mikhailov

DNA migration in topologically structured microchannels with periodic cavities is investigated experimentally and with Brownian dynamics simulations of a simple bead-spring model. The results are in very good agreement with one another. In…

Biological Physics · Physics 2009-11-10 Martin Streek , Friederike Schmid , Thanh Tu Duong , Dario Anselmetti , Alexandra Ros

Multi-nucleated cells exist in all domains of life, ranging from animals, plants and fungi to single-celled organisms such as the slime mold Physarum polycephalum. The large cell size, in the case of Physarum reaching centimeters and more,…

Biological Physics · Physics 2026-05-12 Johnny Tong , Kaspar Wachinger , Fabian K. Henn , Nico Schramma , Siyu Chen , Karen Alim

The migratory dynamics of cells in physiological processes, ranging from wound healing to cancer metastasis, rely on contact-mediated cell-cell interactions. These interactions play a key role in shaping the stochastic trajectories of…

Many-body localization (MBL) is a novel prototype of ergodicity breaking due to the emergence of local integrals of motion (LIOMs) in a disordered interacting quantum system. To better understand the role played by the existence of such…

Disordered Systems and Neural Networks · Physics 2022-08-10 S. Adami , M. Amini , M. Soltani

Left-right axis specification establishes embryonic laterality through asymmetric signaling cascades originating at the cellular scale. We previously reported the presence of a directionality bias in confined pairs of endothelial (and…

Cell Behavior · Quantitative Biology 2026-03-31 Egun Im , Ghina Badih , Laetitia Kurzawa , Andreas Buttenschön , Calina Copos

The transport of macromolecules, such as DNA, through the cytoskeleton is critical to wide-ranging cellular processes from cytoplasmic streaming to transcription. The rigidity and steric hindrances imparted by the network of filaments…

Functionalities in crystalline materials are determined by 3-dimensional collective interactions of atoms. The confinement of dimensionality in condensed matter provides an exotic research direction to understand the interaction of atoms,…

The lifetimes of non-covalent A:a knob-hole bonds in fibrin probed with the optical trap-based force-clamp first increases ("catch bonds") and then decreases ("slip bonds") with increasing tensile force. Molecular modeling of…