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Convolutional neural network (CNN) based segmentation methods provide an efficient and automated way for clinicians to assess the structure and function of the heart in cardiac MR images. While CNNs can generally perform the segmentation…

Multi-sequence of cardiac magnetic resonance (CMR) images can provide complementary information for myocardial pathology (scar and edema). However, it is still challenging to fuse these underlying information for pathology segmentation…

Image and Video Processing · Electrical Eng. & Systems 2020-08-14 Zhen Zhang , Chenyu Liu , Wangbin Ding , Sihan Wang , Chenhao Pei , Mingjing Yang , Liqin Huang

State-space models (SSMs) are an important modeling framework for analyzing ecological time series. These hierarchical models are commonly used to model population dynamics, animal movement, and capture-recapture data, and are now…

Generating virtual populations of anatomy that capture sufficient variability while remaining plausible is essential for conducting in-silico trials of medical devices. However, not all anatomical shapes of interest are always available for…

Image and Video Processing · Electrical Eng. & Systems 2024-03-05 Haoran Dou , Seppo Virtanen , Nishant Ravikumar , Alejandro F. Frangi

With the rapid growth of modern technology, many large-scale biomedical studies have been/are being/will be conducted to collect massive datasets with large volumes of multi-modality imaging, genetic, neurocognitive, and clinical…

Methodology · Statistics 2018-03-07 Farouk S. Nathoo , Linglong Kong , Hongtu Zhu

Automatic diagnosis of coronary heart disease helps the doctor to support in decision making a diagnosis. Coronary heart disease have some types or levels. Referring to the UCI Repository dataset, it divided into 4 types or levels that are…

Machine Learning · Computer Science 2015-11-17 Wiharto Wiharto , Hari Kusnanto , Herianto Herianto

With systems for acquiring 3D surface data being evermore commonplace, it has become important to reliably extract specific shapes from the acquired data. In the presence of noise and occlusions, this can be done through the use of…

Computer Vision and Pattern Recognition · Computer Science 2015-03-30 Alan Brunton , Augusto Salazar , Timo Bolkart , Stefanie Wuhrer

Structured state space models (SSMs), the core engine behind prominent neural networks such as S4 and Mamba, are linear dynamical systems adhering to a specified structure, most notably diagonal. In contrast to typical neural network…

Machine Learning · Computer Science 2024-11-01 Yuval Ran-Milo , Eden Lumbroso , Edo Cohen-Karlik , Raja Giryes , Amir Globerson , Nadav Cohen

Self-supervised learning is crucial for clinical imaging applications, given the lack of explicit labels in healthcare. However, conventional approaches that rely on precise vision-language alignment are not always feasible in complex…

Computer Vision and Pattern Recognition · Computer Science 2023-04-18 Jielin Qiu , Peide Huang , Makiya Nakashima , Jaehyun Lee , Jiacheng Zhu , Wilson Tang , Pohao Chen , Christopher Nguyen , Byung-Hak Kim , Debbie Kwon , Douglas Weber , Ding Zhao , David Chen

The effects of the aortic geometry on its mechanics and blood flow, and subsequently on aortic pathologies, remain largely unexplored. The main obstacle lies in obtaining patient-specific aorta models, an extremely difficult procedure in…

Traditional machine learning (ML) algorithms, such as multiple regression, require human analysts to make decisions on how to treat the data. These decisions can make the model building process subjective and difficult to replicate for…

Machine Learning · Computer Science 2022-01-31 William Franz Lamberti

In this paper we will focus on the potential and on the challenges associated with the development of an integrated brain and spinal cord modelling framework for processing MR neuroimaging data. The aim of the work is to explore how a…

Computer Vision and Pattern Recognition · Computer Science 2017-07-06 Claudia Blaiotta , Patrick Freund , M. Jorge Cardoso , John Ashburner

In the present work, irregular complex joints of the human arm are modelled in the computer-aided design environment. Accurately the geometric models of the joints and surrounding bony regions are developed from computed tomography data set…

Tissues and Organs · Quantitative Biology 2018-07-11 Amit Kumar Bedaka , Ponnusamy Pandithevan

Spatial-sign covariance matrix (SSCM) is an important substitute of sample covariance matrix (SCM) in robust statistics. This paper investigates the SSCM on its asymptotic spectral behaviors under high-dimensional elliptical populations,…

Statistics Theory · Mathematics 2017-05-19 Weiming Li , Wang Zhou

Instrumental variables analysis using genetic markers as instruments is now a widely used technique in epidemiology and biostatistics. As single markers tend to explain only a small proportion of phenotypic variation, there is increasing…

Methodology · Statistics 2015-04-09 Paul S. Clarke , Tom M. Palmer , Frank Windmeijer

The electrocardiogram (ECG) is modulated by torso-heart anatomy, and this challenges patients' diagnosis and risk stratification. This study aims to quantify how torso-heart anatomical factors affect sex-differences in ECG biomarkers in…

Dynamical systems are often subject to algebraic constraints in conjunction to their governing ordinary differential equations. In particular, multibody systems are commonly subject to configuration constraints that define kinematic…

Dynamical Systems · Mathematics 2023-02-24 Mingwu Li , Shobhit Jain , George Haller

This paper introduces the concept of a bi-scale metric for use in the cooperative phase of the self-organizing map (SOM) algorithm. Use of a bi-scale metric allows segmentation of the map into a number of regions, corresponding to…

Neural and Evolutionary Computing · Computer Science 2018-05-10 William H. Wilson

Deformation modeling of cardiac muscle is an important issue in the field of cardiac analysis. Many approaches have been developed to better estimate the cardiac muscle deformation, and to obtain a practical model to be used in diagnostic…

Computational Engineering, Finance, and Science · Computer Science 2015-12-01 Ahmadreza Baghaie , Hamid Abrishami Moghaddam

The stochastic block model (SBM) is a popular model for capturing community structure and interaction within a network. Network data with non-Boolean edge weights is becoming commonplace; however, existing analysis methods convert such data…

Methodology · Statistics 2020-07-20 Matthew Ludkin